Protein

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Genbank accession
QBX28828.1 [GenBank]
Protein name
hyaluronate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTETIPLRVQFKRMTAEEWARSDVILLEGEIGFETDTGYAKFGDGKSRFSELKYLNKPDLGAFAQKEETNSKITKLESSKADKNAVYLKAESKIELNKKLNLTGGIVTGQLRLKPNSGIKHSSSTGGAINIDMSKSKGAAMVMYTNKDTTDGPLMILRSDKDTFNQSVQFVDYRGKTNAVNIVMRQPSTPNFSSALNITSANEGGSAMQLRGSEEALGTLKITHENPSLKANYDKNAAALSIDIVKKTNGAGTAAQGIYINSTSGTTGKLLRIRNLGDDKFYVEHDGGFYAKKTSQIDGNLKLKNPTASDHAATKAYVDDEVKKLKALLTNKQA
Physico‐chemical
properties
protein length:334 AA
molecular weight: 36306,64910 Da
isoelectric point:9,37327
aromaticity:0,06287
hydropathy:-0,55898

Domains

Domains [InterPro]
SSF69349
STR
7–329
SSF69349
IPR041352
ATT
9–47
IPR041352 IPR009860
QBX28828.1
1 334
Architecture
ATT
STR
ATT 7-47 | STR 48-329 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX28828.1
1 334
Domain Start End Length (AA) Confidence
N-terminal 1 106 106 0,9769
Central domain 107 305 200 0,0818
C-terminal 306 334 28 0,9889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-106
Central
107-305
C-terminal
306-334

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan470
[NCBI] 		2548189 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes
[NCBI] 		1314 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX28828.1 [NCBI]
Genbank nucleotide accession
MK448951 [NCBI]
CDS location
range 31892 -> 32896
strand +
CDS
ATGACAGAAACTATACCGCTACGAGTCCAATTTAAGCGGATGACTGCCGAAGAATGGGCTCGCAGCGATGTCATCTTACTTGAGGGTGAGATAGGCTTTGAGACCGACACAGGATATGCTAAGTTTGGTGATGGTAAAAGCCGATTTAGTGAGCTTAAGTACCTTAATAAACCAGATCTAGGTGCGTTTGCACAAAAAGAAGAAACTAATAGTAAAATCACCAAATTAGAATCAAGCAAAGCAGATAAAAACGCTGTTTACTTAAAAGCAGAGTCAAAAATAGAGCTAAACAAAAAATTGAATTTGACAGGCGGCATAGTGACAGGACAACTACGACTTAAACCTAATAGTGGTATTAAGCACTCATCTTCTACAGGAGGAGCGATTAACATTGATATGTCTAAATCGAAAGGTGCTGCTATGGTGATGTATACAAATAAAGATACTACTGATGGGCCACTAATGATTTTACGCTCTGACAAAGATACGTTTAATCAGTCGGTTCAATTTGTGGATTACAGAGGTAAGACTAATGCTGTAAATATTGTAATGCGCCAGCCAAGCACACCTAATTTTTCCTCGGCACTTAATATAACTAGTGCCAATGAAGGCGGTAGTGCGATGCAGCTACGAGGGTCAGAAGAAGCGCTAGGAACGCTAAAAATTACTCATGAGAACCCAAGTCTTAAAGCGAATTATGATAAAAATGCGGCAGCGTTATCCATTGATATTGTCAAAAAGACAAACGGTGCAGGAACAGCCGCTCAGGGAATCTACATTAACTCAACCTCAGGCACGACAGGGAAGTTGCTTAGGATTAGAAACCTTGGTGATGATAAGTTCTACGTCGAGCATGACGGTGGTTTTTATGCCAAGAAAACTTCGCAGATTGATGGCAACCTGAAACTCAAGAATCCCACAGCGAGTGATCATGCGGCAACCAAAGCTTATGTTGATGATGAAGTCAAAAAATTAAAAGCACTCTTAACGAATAAGCAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf96e8a7474d765c2847ff1d7756a58d9b17c308229f151cf6e65e0552876cdf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7886
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank