Protein

View in Explore
Genbank accession
XBS35511.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MTIAIKRENGDLIWFDAVTEFGRQYRGSVSSNPIETGGKITDHITTENPVFTLTAVVSDADFNLNRPVINDNEAQTYKINNKEFVNTQPVTIPAVISTSRLDPSRIFPEVITQFIPPEIPSATVLPQKGDKVAYDIERQLIDMQRNAEVFSLLDFRDGIIWDQIERCIFTDLSFTENAETGSSLQPRMTIEAVTFTDTRYVEVRVNKGRKTAKKEKRDTKEGDTEASNATSQDSPTFKRSQMKEAQIRTQVAR
Physico‐chemical
properties
protein length:253 AA
molecular weight: 28613,76380 Da
isoelectric point:5,19096
aromaticity:0,07510
hydropathy:-0,54704

Domains

Domains [InterPro]
IPR048494
ATT
15–203
IPR048494
DC_1100
STR
26–253
DC_1100
XBS35511.1
1 253
Architecture
ATT
STR
ATT 15-203 | STR 204-253
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage GEC_MRC
[NCBI] 		3158843 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBS35511.1 [NCBI]
Genbank nucleotide accession
PP836135.1 [NCBI]
CDS location
range 54150 -> 54911
strand -
CDS
ATGACAATTGCTATCAAAAGAGAGAACGGAGACCTAATCTGGTTCGACGCTGTTACAGAGTTCGGAAGACAGTACCGTGGCTCTGTGAGTTCCAACCCAATCGAAACGGGAGGAAAAATCACAGACCACATTACTACAGAAAACCCAGTCTTCACTCTTACAGCCGTCGTATCAGACGCAGACTTCAACTTGAACAGGCCCGTTATCAACGACAACGAGGCCCAGACATACAAGATCAACAACAAAGAGTTCGTGAATACGCAGCCGGTAACCATCCCGGCTGTTATCTCAACCTCTAGACTAGACCCTAGCAGAATCTTTCCAGAAGTTATCACTCAGTTTATTCCTCCTGAGATTCCTTCTGCAACTGTCCTCCCTCAAAAGGGTGATAAAGTCGCTTATGATATTGAGCGCCAACTGATCGACATGCAGCGTAATGCTGAGGTCTTCAGTTTGCTGGACTTCCGAGACGGTATCATCTGGGATCAAATCGAAAGATGCATCTTCACCGACTTGTCTTTCACTGAAAACGCCGAGACAGGTAGCAGCCTTCAACCTCGTATGACAATCGAGGCTGTGACATTCACAGATACTCGTTATGTCGAGGTGAGGGTTAACAAGGGTAGAAAGACCGCTAAGAAAGAAAAGAGAGACACCAAAGAAGGTGATACCGAGGCTAGCAATGCTACCAGCCAAGACTCTCCTACATTCAAGCGTAGTCAAATGAAAGAGGCTCAGATTAGAACTCAGGTTGCGAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
18054fa9947f69de73e223df893352694769b98f210a487aea72a74b57579675
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7268
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Relevance of the bacteriophage adherence to mucus model for Pseudomonas aeruginosa phages Almeida,G.Md.F., Ravantti,J., Grdzelishvili,N., Kakabadze,E., Bakuradze,N., Javakhisvili,E., Megremis,S., Chanisvili,N., Papadopoulos,N. and Sundberg,L.-R. 2024 38912817 GenBank