Protein

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Genbank accession
XGK31926.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MATVPTNNPIPSEDPRDLKFNAGKIDEVVTSDAHYYTDRFGVRRWTIAGFQYTAEEAIRNYGYITMDSFEDGATLTLPNQTLRYEANGEYYRWDGEFPKVVPAGSTPDSTGEVKLGAWVSVGDASLRADIAKPTGTNLIGAKNGETLSTVLGSRWANSGADKKEIRFDLPLLFPDYDAILAAHPDWTFIYPGSFCIGDDGKIYIAYGPSNNAATERFVVVYSGEGEYLGYLQTNNGGTGVNGSAVSEGIIVTNYYGSLKLFLGSYDGNLAEFDISAVTYGTTISYTALHQVGLYNQFSFHNGMWAVEQAIPALGINRQRNAIAYFNSAFALTGFTEFSPYDAGYITETTTDYWSLQTKRQAICLAPGVLIMAFGGVYITGTTVEAPTNYQGVKAFSTDGHKMVEAVIPPTGFISVLDAKGLTTSRIENEGICYSNGEVFTLWIYNDRTTSNAYTHGILITKEYSNFPDLDFSAVTTVSPGYDTIRMASGVYPRILAGDVLYNPLTGIAMTSLSAVLDFMRLSGQKAVTIYTSSTGLTDLAGVAYPIGIELHISNLNNKSFSIDQTGPTTRKTVRVTYDTSGYTVVTAATGLETYRLTLNNTDSGSLTQGRIAARAFGNTTLTEAEQILVLDQQSSASAHSLILGGGSSLFKSATTISFATNPSPATLGGTIRWRLDDTSLRPYTDNAYNLGNPSLRVAQVFAAIGTINTSDSREKTDPSEISDDILDAWGDVQVITYKWLASIASKGEDSARWHFGVIAQQVRDTFIKHGLDGTAFGLLCYDEWEDEYEPEFVDEIVTVNIDGVDTEVTRQVKTGNTLLTRAAGNRWGIRPDQCFWLEAAYQRRRCDRIEERLKKLEAK
Physico‐chemical
properties
protein length:859 AA
molecular weight: 93843,48700 Da
isoelectric point:4,82247
aromaticity:0,11059
hydropathy:-0,19767

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
62–132
G3DSA:2.10.10.80 IPR036388
IPR040775
RBD
63–123
IPR040775 IPR036388
DC_0539
STR
91–733
DC_0539 Coil
cd10144
CHP
710–845
cd10144
IPR030392
CHP
710–771
IPR030392
IPR030392
CHP
710–859
IPR030392
XGK31926.1
1 859
Architecture
ATT
STR
RBD
ATT 62-132 | STR 133-733 | RBD 734-859
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGK31926.1
1 859
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,9929
Central domain 159 424 267 0,9886
C-terminal 425 859 434 0,6592
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-424
C-terminal
425-859

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HC8A
[NCBI] 		3160836 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGK31926.1 [NCBI]
Genbank nucleotide accession
PQ280049.1 [NCBI]
CDS location
range 31590 -> 34169
strand +
CDS
ATGGCTACCGTACCAACAAATAATCCAATCCCAAGCGAAGACCCGCGCGATCTGAAATTTAATGCCGGTAAGATCGACGAGGTAGTGACATCTGATGCACATTACTATACCGATCGCTTCGGTGTACGCCGCTGGACAATTGCTGGATTCCAATACACCGCAGAAGAAGCAATCCGTAACTACGGTTACATAACAATGGACAGCTTCGAAGATGGCGCGACACTGACGCTTCCCAATCAGACACTGCGTTATGAAGCGAACGGAGAATATTACCGTTGGGATGGGGAGTTTCCAAAAGTAGTGCCCGCTGGTTCAACTCCAGACAGCACGGGTGAGGTTAAATTAGGAGCGTGGGTTAGTGTTGGTGATGCGTCATTGCGCGCCGATATTGCAAAACCAACCGGAACAAATTTAATTGGCGCAAAAAACGGGGAAACACTGTCTACAGTCCTGGGTAGTCGTTGGGCTAATTCGGGCGCAGATAAAAAAGAAATTCGTTTTGACCTGCCATTACTATTCCCAGATTACGATGCGATTCTGGCGGCACACCCTGACTGGACGTTTATTTATCCAGGGTCATTCTGTATCGGGGATGATGGCAAAATCTATATTGCATACGGCCCAAGTAATAACGCAGCGACGGAACGTTTCGTTGTAGTTTACTCAGGGGAAGGTGAATACTTAGGGTATCTCCAGACTAATAATGGAGGCACCGGGGTAAATGGTTCTGCGGTATCCGAGGGGATTATCGTAACCAATTACTATGGTTCACTTAAGTTATTCCTGGGATCCTACGATGGTAACTTAGCTGAGTTTGATATCTCAGCGGTGACCTACGGCACCACGATTAGCTATACAGCCTTGCATCAGGTAGGTCTGTATAACCAGTTCTCCTTCCACAATGGAATGTGGGCAGTTGAACAGGCCATCCCAGCGTTGGGCATTAACCGCCAACGTAATGCTATTGCGTACTTCAACTCCGCATTTGCATTAACTGGCTTCACGGAATTTTCTCCGTATGACGCTGGATACATCACGGAAACTACTACTGATTATTGGTCACTTCAAACTAAGCGACAAGCAATCTGTTTAGCTCCTGGTGTTTTGATTATGGCATTCGGTGGTGTGTACATTACAGGAACAACTGTAGAAGCGCCTACTAATTATCAGGGGGTAAAAGCGTTCAGCACCGATGGGCACAAAATGGTAGAGGCAGTAATTCCTCCTACTGGTTTTATTAGTGTCCTGGATGCTAAAGGCTTAACGACTTCTCGTATAGAGAATGAGGGCATCTGCTATTCAAATGGTGAAGTGTTCACCTTATGGATCTATAACGACCGAACCACATCGAATGCGTATACGCATGGAATCCTAATTACCAAAGAGTATTCCAATTTCCCGGACTTGGATTTTTCTGCGGTGACAACGGTATCCCCAGGTTACGATACCATTCGGATGGCTTCTGGGGTTTATCCACGAATTCTCGCAGGCGACGTACTCTATAACCCTCTGACCGGTATTGCCATGACTTCGTTGTCAGCAGTATTGGACTTTATGCGATTGTCCGGGCAGAAGGCAGTTACTATCTATACATCAAGCACCGGTCTTACAGACCTGGCTGGAGTTGCCTACCCAATCGGGATAGAGCTTCATATTAGCAACCTGAATAACAAGAGCTTCTCTATAGATCAGACCGGGCCAACTACCCGTAAAACTGTTCGTGTTACTTATGACACCTCCGGTTACACAGTAGTTACTGCGGCTACTGGTTTGGAGACTTACCGTTTAACTTTAAACAATACTGACTCTGGGTCTTTAACTCAGGGGCGTATCGCTGCCAGAGCTTTCGGTAACACAACTTTAACCGAAGCAGAACAGATTCTTGTCCTCGATCAACAAAGTTCCGCATCTGCACATTCTCTTATTTTAGGTGGCGGCTCTTCATTATTTAAGAGTGCTACGACTATTAGTTTTGCTACTAATCCGTCGCCCGCAACCCTAGGTGGCACTATTCGATGGCGTTTAGATGATACATCTCTACGTCCATACACAGATAATGCTTACAATTTAGGTAATCCATCATTACGTGTGGCTCAAGTATTCGCGGCAATTGGTACTATTAATACGTCTGATTCCCGTGAAAAAACTGATCCTTCTGAAATATCGGATGATATCCTTGATGCCTGGGGCGATGTACAGGTGATCACTTATAAGTGGTTAGCTTCTATCGCATCTAAAGGGGAGGACTCTGCTCGTTGGCATTTTGGGGTAATTGCCCAACAGGTTCGTGACACGTTCATCAAGCATGGATTGGATGGTACTGCCTTTGGCCTGCTTTGTTACGACGAGTGGGAAGATGAATATGAACCTGAGTTCGTTGATGAGATTGTTACTGTTAATATTGATGGTGTCGATACCGAAGTTACCCGTCAAGTGAAAACCGGTAATACCCTACTTACTAGAGCTGCCGGTAATCGCTGGGGCATTCGTCCCGATCAGTGTTTCTGGTTGGAGGCCGCTTATCAGCGACGCCGCTGTGATCGTATTGAAGAGCGATTAAAAAAACTGGAGGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
562dd1d87d602f82672d60d3882db627367c24c5ffb1d49e625a1fd8ed75258e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6458
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50