Protein

View in Explore
Genbank accession
AUR92933.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MSARLIRYTLDGIKLTHDISFGVTDGDGFDVYVNRTKLDKGIDYKVVGTDEQLRGGDGTITLTIPHAASDVLLILSDTLARRVTNFAKAARFEEAEIDNEFDNLLRLLEDAALNLQSTPYFSPPDIGLVNGELPPLIAGGVLRVNTTRNGFELVELDKVPEFEEALRKATEQANKSEAKAQEAAQTVAGFDQHAESKKQEVNQIAEQASDSAELSKKWAEGETPSGEQPSNTNNAKYWSEQAHAAMAGKVNKLGGDAGAIEVTTGTEAQKPDAASQALALLRFTNGKGFEGYDPEQKIWGGIGGGIERQQLNTVVIYAYRSGGATPAAITLPTGYKWSDFERIEWGMDYATADYAQTCAITKEQLSDPAWKSVIRQDVAPSPIFMSLSRKSETQCDVGNVGIVGASGGLRFITGYINKYATENVSKIIQVNGGADIAANQRYEIDIATGLGADYVGKDLIVEVEIYNDGTSGGKIGWGVVPITVHYDGSYASYGVNAGVLESSIEIYTGNTHLCASGNDGRVNVFATTSAINAAPCRVKVWKIDHFITNVTSSVGGN
Physico‐chemical
properties
protein length:557 AA
molecular weight: 59761,81140 Da
isoelectric point:4,82116
aromaticity:0,07899
hydropathy:-0,28474

Domains

Domains [InterPro]
DC_1894
ATT
1–300
DC_1894 DC_0781
Coil
Unmapped
159–186
Coil
AUR92933.1
1 557
Architecture
ATT
RBD
ATT 1-300 | RBD 410-544 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.179.O._10N.286.45.F12
[NCBI] 		1881432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92933.1 [NCBI]
Genbank nucleotide accession
MG592546.1 [NCBI]
CDS location
range 15263 -> 16936
strand +
CDS
ATGTCAGCACGATTAATACGATACACATTGGACGGCATCAAGCTAACTCATGACATTAGCTTTGGTGTGACGGATGGTGATGGATTTGATGTTTATGTCAATCGAACCAAATTAGATAAGGGCATTGACTACAAGGTTGTAGGAACTGACGAGCAACTAAGGGGTGGTGATGGGACGATTACGCTAACAATCCCGCACGCTGCATCGGATGTATTATTGATCTTGTCTGACACATTGGCGCGCCGTGTAACCAACTTTGCAAAAGCGGCACGCTTTGAAGAGGCGGAGATCGATAACGAGTTTGATAACCTATTGCGACTACTGGAAGATGCTGCACTAAACCTACAGTCAACACCTTACTTCTCACCGCCAGATATAGGGCTGGTTAATGGCGAATTACCACCGCTTATTGCTGGTGGCGTATTGCGCGTAAACACGACCAGGAACGGATTTGAGCTGGTTGAGTTGGATAAGGTTCCAGAGTTTGAGGAGGCGCTAAGAAAGGCAACGGAGCAGGCTAACAAGTCGGAAGCAAAAGCGCAAGAGGCGGCGCAAACGGTGGCTGGATTCGATCAGCACGCCGAGAGCAAAAAGCAAGAAGTAAATCAGATCGCGGAGCAGGCTAGTGATAGCGCGGAGTTATCTAAAAAGTGGGCAGAGGGTGAAACGCCAAGCGGCGAACAGCCCAGCAACACAAACAATGCAAAATATTGGTCTGAACAGGCGCACGCCGCAATGGCGGGAAAGGTAAACAAGTTGGGCGGCGATGCTGGAGCAATTGAAGTAACAACAGGAACAGAGGCGCAAAAGCCAGACGCAGCTAGTCAGGCGCTGGCGTTATTAAGATTTACGAATGGTAAAGGGTTTGAGGGGTACGACCCAGAGCAAAAAATCTGGGGTGGAATAGGTGGCGGTATCGAGCGCCAGCAATTAAACACTGTTGTGATTTATGCTTACCGATCGGGCGGCGCAACGCCAGCAGCTATTACACTACCGACAGGTTACAAATGGAGTGATTTTGAGCGCATAGAATGGGGTATGGATTACGCGACAGCGGATTACGCGCAAACATGCGCCATTACCAAGGAGCAACTAAGCGATCCAGCTTGGAAAAGCGTAATAAGACAGGACGTCGCGCCAAGTCCTATATTTATGTCCTTATCAAGAAAATCGGAAACTCAGTGTGATGTGGGTAATGTCGGAATTGTTGGTGCGAGTGGTGGCCTGAGATTCATAACTGGTTATATCAATAAATACGCAACTGAAAATGTAAGTAAGATAATCCAAGTAAACGGCGGCGCAGATATTGCAGCCAACCAGCGTTATGAAATAGATATCGCCACGGGGCTAGGTGCTGATTATGTAGGTAAAGACCTGATTGTTGAGGTTGAGATTTATAACGATGGAACGTCTGGTGGGAAAATCGGATGGGGTGTAGTTCCTATAACGGTGCATTACGATGGCTCATACGCATCATATGGCGTGAACGCGGGTGTACTTGAGAGTTCCATAGAAATTTATACGGGTAATACACATCTATGCGCTTCCGGTAACGATGGGCGTGTAAACGTATTTGCTACTACGTCAGCTATTAACGCAGCGCCATGTCGAGTAAAGGTGTGGAAAATTGACCACTTTATTACAAACGTAACAAGCTCAGTTGGTGGAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1ff7f58b4345e862db024f86e179ce8246f7d92b1a965d38de9839b2781b256
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank