Protein

View in Explore
Genbank accession
XDT01980.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,61
Protein sequence
MPVTRVATAQQSLLLAGNLTSHTIDRAVNVNPSAGPYVYGIVAYGFTSDVSLTGDPVTCTWTGGTPVALLASPLLFGSSQNMLMGWIVENPSSGTVQVSHTGIGTSTWAKARFLTVGVWSQAQQLDLVNIQSAVVSAVGSTNVTSHTVTVPSILPASRVIAAHLVGRGKAITAYTGGTKVASANSSGTPNSPSGNGQMILGECRGAASVNSTVTQSPSTGLWATFGLNIDPAPVVFGAKGTHKAGKGSFGASVYRFAEPHPDRLYVVPPIGSVNDKVLADNYIRSLDGVAMPVYVKDPDDTSDYTFDWSNHLADDDKITHVECTTSGSLRLISQPALDDAGVLTQVWITGSTVNVTRTVRIRCSTAKGRRFDRTFWIVGSQG
Physico‐chemical
properties
protein length:382 AA
molecular weight: 39983,55170 Da
isoelectric point:8,32011
aromaticity:0,07068
hydropathy:0,03874

Domains

Domains [InterPro]
IPR056928
RBD
295–377
IPR056928
IPR056928
RBD
296–377
IPR056928
XDT01980.1
1 382
Architecture
RBD
RBD 295-377 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Maddy2
[NCBI] 		3240400 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycobacterium sp.
[NCBI] 		1785 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDT01980.1 [NCBI]
Genbank nucleotide accession
PQ115172 [NCBI]
CDS location
range 16547 -> 17695
strand +
CDS
ATGCCGGTCACTCGCGTCGCCACGGCGCAGCAATCCCTGCTGCTGGCGGGGAATCTGACGTCGCACACCATCGACCGTGCCGTGAACGTGAATCCCTCTGCGGGACCCTACGTGTACGGCATCGTGGCGTACGGATTCACGAGCGATGTGTCACTGACTGGCGACCCGGTCACGTGCACATGGACCGGCGGGACTCCAGTGGCCCTGCTGGCGTCGCCGCTGCTGTTCGGGTCGTCCCAGAACATGCTGATGGGCTGGATTGTCGAAAACCCGTCGAGTGGCACGGTTCAGGTGTCGCACACGGGGATCGGCACCAGTACGTGGGCGAAGGCTCGGTTCCTGACGGTGGGTGTGTGGTCGCAGGCTCAGCAGTTGGACCTGGTGAACATTCAGTCCGCCGTCGTCAGTGCTGTCGGATCCACAAACGTCACGTCACACACGGTGACTGTGCCGTCGATTCTGCCGGCATCCCGCGTGATCGCTGCGCACCTGGTGGGGCGCGGTAAGGCGATCACCGCCTACACGGGCGGGACGAAAGTGGCGTCGGCGAACTCGTCCGGCACCCCGAACTCACCCAGTGGCAACGGGCAGATGATCTTGGGGGAGTGCCGTGGTGCTGCATCGGTGAACTCCACTGTGACCCAGTCGCCTTCCACTGGCTTGTGGGCGACGTTCGGGCTGAACATCGATCCCGCGCCCGTCGTGTTCGGAGCGAAGGGAACACACAAGGCGGGGAAGGGTTCGTTCGGTGCGTCGGTGTACCGGTTCGCTGAGCCGCACCCGGATCGCCTGTACGTGGTGCCGCCGATCGGTTCGGTGAATGACAAGGTGCTGGCCGACAACTACATCCGCTCACTGGATGGCGTCGCGATGCCGGTGTACGTGAAGGACCCTGACGACACCAGTGATTACACGTTTGACTGGTCGAACCATCTTGCCGACGACGACAAGATCACCCACGTCGAGTGCACCACGTCGGGATCGCTGCGCCTGATCTCGCAACCCGCTCTCGATGACGCGGGCGTGCTCACTCAGGTGTGGATCACCGGCAGCACGGTCAACGTGACGCGGACTGTTCGGATTCGTTGTTCGACCGCGAAGGGCCGGCGCTTCGACCGCACATTCTGGATCGTGGGGTCGCAGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
204395d1501bf35aa21180565e4d1629a57e589dd7652ad3a84d132de1d943b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of Mycobacterium sp. Elmwood and accompanying phage, isolated from a public swimming pool in Nebraska Hernandez-Velazquez,D., Vasquez,M.K., Petre,R. and Kyndt,J.A. 2024 39345178 GenBank