Protein

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Genbank accession
XDJ03646.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESRYVKFDPTDTNFPPEITDVQAAIAAISPAGVNGVPDASSTAKGILFLATEQEVIDGTNNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESSNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSETAATESAQGVVQLATVAQVRQGTLREGYAISPYTFMNSSATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGNPSNPGLPDMRGLFVRGAGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDAGAFGNTRKSDFVGTRKGLDWDNRSYFTNDGYEIDPESQRNDRYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55873,21420 Da
isoelectric point:6,21656
aromaticity:0,06641
hydropathy:-0,39564

Domains

Domains [InterPro]
DC_0176
STR
1–447
DC_0176
IPR015173
STR
246–326
IPR015173 IPR037053 IPR044916
SSF69349
STR
246–326
SSF69349 SSF88874
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448
XDJ03646.1
1 527
Architecture
STR
ATT
STR
STR 1-329 | ATT 330-400 | STR 401-525 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Manna
[NCBI] 		3234042 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ03646.1 [NCBI]
Genbank nucleotide accession
PP987310 [NCBI]
CDS location
range 89203 -> 90786
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGTTATGTAAAATTTGATCCTACCGATACGAATTTTCCACCAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGCGTAAATGGAGTTCCTGATGCATCGTCAACAGCAAAGGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATAGATGGAACTAATAATACCAAAGCAGTTACACCAGCAACGTTGGCAACAAGATTATCATATCCAAACGCAACTGAAACTGTTTACGGATTAACAAGATATTCAACCAATGATGAAGCCATTGCCGGAGTTAATAATGAATCTTCTATAACTCCAGCTAAATTTACTGTTGCTCTTAATAATGCTTTTGAAACTCGTGTTTCAACTGAATCCTCGAATGGTGTTATTAAAATTTCATCTCTACCGCAAGCATTAGCTGGTGCAGATGATACTACTGCAATGACTCCATTAAAAACACAACAGTTAGCTATTAAATTAATTGCGCAAATTGCTCCTTCTGAAACTGCAGCTACCGAATCGGCCCAAGGCGTTGTTCAATTAGCAACAGTAGCGCAAGTTCGTCAAGGAACTTTAAGAGAAGGCTATGCAATTTCTCCTTATACGTTTATGAATTCATCTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACACAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGCGCAACTCTTAATGGTCGTGGTTCTACAACGTCAATGAGAGGCGTAGTTAAATTAACAACAACAGCCGGTTCACAGAGTGGAGGTGATGCTTCATCAGCCTTAGCTTGGAATGCTGACGTTATCCACCAAAGAGGCGGTCAAACTATTAATGGAACACTTCGCATTAATAACACGCTTACAATAGCTTCAGGTGGAGCAAATATTACCGGAACAGTTAACATGACTGGCGGTTATATTCAAGGTAAGCGTGTCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGTTTTTGCCACGGTGGAACTGTTTCAGCATCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATATGGCGGAAACCCATCAAATCCTGGATTGCCCGACATGCGCGGTCTTTTTGTTCGTGGCGCTGGCCGTGGCTCTCATTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAACCTAGATTAGGCGTAGGTTGTACTGGTGGATATGTTGGCGAAGTACAGAAACAACAGATGTCTTATCATAAACATGCTGGTGGATTTGGTGAGCATGATGATGCTGGAGCATTTGGTAATACCCGCAAATCAGATTTTGTCGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAACGACGGATATGAAATTGATCCAGAATCGCAACGAAATGACAGATATACATTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
93294193a17c524c3586f5d25cb327e1e00227b4a647ba45bcf6c365648e674c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological characterization and genomic analysis of Salmonella infecting phages Prasanth,M., Oppong,K. and Young,R. 2024-01-17 — GenBank