Protein

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Genbank accession
QXO12245.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MLPFARIVEYGNVAPPKKKLNGDVEVLNPVPVPAARRNAGACSAQGKIYIFGGYTGTILKTMQVYDPSDNTFTNLTATPNGRYSTTLSYYNGFIYMYSGNRNVAGDNNNDFWKYEISTDTWTSLSTTGYGNGGSDAYLCTAGDYLYVVSGDGSNQLYRYNPNLDEWNQLTSVPVNISTNGGACSSDTHIFAMSGGVIYKYDISTDMWEMKASQNTVITSRLCYIDGYVYAYGTGTLMVYDVNADSWSSFNPSPSYNATQNCLVSMYKEDGTPSVYSLFGGGVTSSVYRFT
Physico‐chemical
properties
protein length:290 AA
molecular weight: 31767,79390 Da
isoelectric point:4,73068
aromaticity:0,14138
hydropathy:-0,31345

Domains

Domains [InterPro]
IPR015915
STR
17–221
IPR015915
PTHR24412
Unmapped
27–194
PTHR24412
IPR015915
STR
31–208
IPR015915
PF24681
STR
31–170
PF24681
IPR006652
STR
47–92
IPR006652 IPR006652
QXO12245.1
1 290
Architecture
STR
STR 17-221 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12245.1
1 290
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,0792
Central domain 231 279 50 0,2717
C-terminal 280 290 10 0,5382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-279
C-terminal
280-290

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_44
[NCBI] 		2859282 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12245.1 [NCBI]
Genbank nucleotide accession
MW879343 [NCBI]
CDS location
range 354372 -> 355244
strand -
CDS
ATGTTACCATTTGCGAGAATAGTCGAATACGGAAATGTTGCACCACCTAAAAAGAAGCTGAATGGCGATGTAGAAGTATTAAATCCTGTACCAGTACCGGCAGCGAGAAGGAATGCGGGTGCTTGTTCAGCACAGGGAAAAATATATATATTTGGGGGATATACGGGAACTATATTAAAGACAATGCAGGTATACGATCCATCAGATAATACATTTACAAATTTAACTGCTACACCAAATGGAAGATATAGTACTACTTTGAGTTATTACAATGGTTTTATTTACATGTACAGTGGTAATAGAAATGTTGCTGGGGATAATAATAATGATTTTTGGAAGTACGAGATTAGTACTGATACATGGACGAGTTTAAGTACTACTGGATATGGAAATGGTGGTTCAGATGCATATTTGTGTACGGCTGGAGATTATTTATATGTAGTTTCTGGAGATGGATCAAACCAGCTTTATAGATACAATCCAAATTTAGATGAATGGAATCAATTAACATCGGTTCCAGTTAACATTAGTACAAATGGTGGTGCATGTTCATCGGATACTCATATATTTGCTATGAGTGGTGGTGTTATATATAAGTATGATATTAGTACTGATATGTGGGAAATGAAGGCATCACAAAATACAGTTATTACATCTAGGTTATGTTATATAGATGGTTATGTATATGCATATGGTACAGGTACATTAATGGTATATGATGTAAATGCAGATTCATGGAGTTCGTTTAATCCTTCTCCTTCATATAATGCTACACAGAACTGTTTAGTGTCTATGTATAAGGAAGATGGTACACCTAGTGTATATAGTTTATTTGGTGGTGGAGTAACTAGTTCAGTATATAGGTTCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f59322b2a1de7599ce7b54155e8997999010e4cff1137a5d2e2b4db33410630
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_44 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank