Protein

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Genbank accession
AMB17453.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MEENIKVYVKVDSNNVITQVDSSIFLFNVEDWVKIDEGQGDKFSHAQGNYLDKPLVDMQGKYNYKLMDGKIVDLTDEEKEKLFPTVKQELSLVDRIAMLENLQLQQGGLV
Physico‐chemical
properties
protein length:110 AA
molecular weight: 12626,20900 Da
isoelectric point:4,51827
aromaticity:0,08182
hydropathy:-0,41727

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage HM T
[NCBI] 		1779843 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMB17453.1 [NCBI]
Genbank nucleotide accession
KU517658.1 [NCBI]
CDS location
range 31799 -> 32131
strand +
CDS
ATGGAAGAAAACATAAAAGTTTATGTAAAAGTAGATAGTAATAATGTTATTACGCAAGTTGACAGTAGCATATTCTTATTTAATGTAGAAGATTGGGTGAAGATAGATGAAGGGCAAGGAGATAAGTTTTCTCATGCTCAAGGAAATTACTTAGATAAACCTTTAGTGGACATGCAAGGAAAATATAATTATAAGCTTATGGATGGAAAGATTGTTGATTTAACAGATGAAGAAAAGGAAAAGTTATTTCCTACAGTTAAGCAAGAATTATCATTAGTAGATAGAATTGCTATGCTAGAAAATTTACAATTGCAACAAGGGGGCTTGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
27b708f04467fc918b4feb4fc20f9eef3134c53f1b7ce516cb9c78961e012582
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence analysis of the bacteriophage HM T, a temperate phage of the solvent producer Clostridium saccharoperbutylacetonicum N1-4 (HMT) Stegmann,B.A., Poehlein,A., Daniel,R. and Duerre,P. 2020-07-01 — GenBank