Protein

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Genbank accession
AAU29224.1 [GenBank]
Protein name
gp38 distal long tail fiber assembly catalyst
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAVVGIPGWIGTSAVAETGQRWMTAASRELRLGNPSWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGAAPIVFNITGDLVSYTKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGGTRVWIAGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGAGCASNNSWLEAGTAGGGGGRPYGLGGTNGAVMPGGNASYTGPGGGGSFGGQWGGGNGGDAGGAGGGAYGRNVKYGSQGGAGRAVFGSSPSWGATGTIYGSWL
Physico‐chemical
properties
protein length:262 AA
molecular weight: 26493,85950 Da
isoelectric point:8,61937
aromaticity:0,11069
hydropathy:-0,21374

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–143
DC_2135
AAU29224.1
1 262
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-143 | RBD 144-262
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JS98
[NCBI] 		293178 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAU29224.1 [NCBI]
Genbank nucleotide accession
EF469154 [NCBI]
CDS location
range 159762 -> 160550
strand +
CDS
ATGGCAGTAGTAGGAATTCCCGGTTGGATTGGAACATCAGCAGTGGCTGAAACAGGTCAACGTTGGATGACAGCAGCTTCTAGAGAATTGCGTCTTGGTAACCCATCTTGGATGTCGCAATTTGCTGGTCGGTCCCGTGAGATTATTCACACCCTTGGCGCAGACCACAACTTTAACGGGCAATGGTTTAGAGACCGTTGTTTTGAAGCCGGTGCCGCACCTATTGTGTTTAATATCACCGGTGATTTAGTATCTTATACTAAAGATGTTCCATTGTTCTTTATGTACGGTGATACCCCTAATGAATACGTTACTTTGAATATTCACGGCGGGGTCCATATGTGGGGACGTGGTGGTAACGGTGGGACCCGTGTTTGGATAGCAGGTACAAATGGTGGTGATGTAATTCAAAACGACATTGGAGGCCGACTCCGTATCTGGAACTATGGCGTTATAGCTTCAGGTGGTGGCGGCGGCGCCGGATGTGCTTCAAATAACTCTTGGCTTGAAGCAGGTACAGCCGGTGGCGGCGGTGGTAGACCATATGGATTAGGTGGTACTAATGGCGCCGTAATGCCTGGCGGCAACGCTAGTTATACCGGACCAGGTGGCGGTGGTAGCTTTGGCGGACAGTGGGGTGGTGGTAATGGTGGCGACGCAGGCGGGGCTGGTGGCGGCGCTTACGGTCGAAACGTTAAATACGGCTCGCAAGGCGGAGCCGGGCGCGCGGTATTCGGAAGTTCTCCTTCATGGGGCGCTACAGGCACTATCTACGGCTCATGGTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
806419aee422c20b509f7b6cf5f79d3b45f7b97a469a1090883d00da83edab1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7690
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages Chibani-Chennoufi,S., Canchaya,C., Bruttin,A. and Brussow,H. 2004 15576776 GenBank
Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli Zuber,S., Ngom-Bru,C., Barretto,C., Bruttin,A., Brussow,H. and Denou,E. 2007 17693496 GenBank