Protein

View in Explore
Genbank accession
QIG65831.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MKPLHLIFLIQDFFMAKKRITELPKSSIVVGTDETLVIQNGKTYKATISQLALAPISVTVDNIVGLQDALDEKVDIEDFDLKANVIHTHVSTDITDASNVGRSILTATNSHAATIQLDAFSASDKGLVPAPGNTSFNVTLTNNGWRPHDIATGAGIKFEENTVSRKVSLDINGMTATANISNFQNVYVAVYDELSTEHLKITLDTFARKTHVHAIADVTGLTTALDTFVTKNGNLSDIQNGQQAVLNLGATNIGNTLFFAANVETAQTAVGLKSGDTNINVQSLNNWSIGSWRSPIVNGALNIWQRGSTFTGIGFNADGWKTRVDSGSPTGVLNTTRESFAPGQIQVADNPRYYIRLRGENFASADLALETGFEDVTIFQGQQVTLSFWARSSTDRDIRLKVIQNFGTGGTVSAEVTTTVLNQFTLNSAWQRVTATFTMPTIAGKILGTNDATDHIRIQVVLKDGTIGSDIGTSYADFALFMLEAGNKATKYEYKPRDYEDTICKRYYQKLTQNATYFATAGSQVLAFTNSFIVPMRVTPTATKVNTANTNVSTTTVTPLNEKNFKYAVVSSTDGNINAESVTEFSADILV
Physico‐chemical
properties
protein length:591 AA
molecular weight: 64061,02190 Da
isoelectric point:5,56138
aromaticity:0,08291
hydropathy:-0,12014

Domains

Domains [InterPro]
DC_0568
STR
25–591
DC_0568
IPR008979
STR
296–440
IPR008979
G3DSA:2.60.120.260
STR
314–475
G3DSA:2.60.120.260
IPR003305
CBM
377–442
IPR003305
QIG65831.1
1 591
Architecture
STR
STR 25-591
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65831.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 112762 -> 114537
strand -
CDS
ATGAAACCTCTTCACCTTATTTTTTTGATTCAGGATTTTTTTATGGCTAAAAAGAGAATTACCGAATTACCTAAGTCATCTATCGTTGTAGGTACTGATGAAACTTTGGTAATTCAAAATGGTAAAACCTACAAGGCAACTATTTCTCAGCTTGCCCTTGCGCCTATCAGCGTTACAGTTGACAATATTGTCGGCTTGCAAGACGCTCTAGACGAAAAGGTTGATATCGAAGATTTCGATCTAAAAGCTAACGTTATTCATACACACGTTTCAACTGACATTACAGATGCGTCTAATGTCGGACGTTCTATTTTGACCGCAACAAATTCCCATGCGGCTACAATTCAATTGGATGCTTTTTCGGCTTCTGATAAGGGTTTGGTTCCAGCACCGGGAAACACTTCATTTAACGTAACCCTCACAAACAATGGTTGGCGTCCTCACGATATCGCAACTGGTGCCGGGATCAAATTTGAAGAAAACACAGTCTCACGTAAAGTTTCTCTTGACATTAATGGAATGACGGCAACAGCCAATATTTCCAATTTCCAGAATGTTTATGTGGCTGTTTATGATGAACTGTCTACAGAACATCTTAAAATAACATTGGACACGTTTGCGCGTAAGACGCACGTACACGCTATTGCAGATGTAACGGGTCTTACAACGGCTCTAGATACGTTTGTAACCAAGAATGGCAATCTATCTGATATTCAGAATGGTCAACAAGCCGTATTGAACTTGGGTGCAACCAACATCGGTAATACCCTATTCTTCGCAGCAAATGTTGAAACAGCACAAACAGCCGTTGGCTTGAAAAGTGGCGATACAAACATCAATGTACAGTCTCTAAATAACTGGTCTATTGGTTCGTGGCGTTCACCAATCGTCAATGGTGCTTTGAATATCTGGCAAAGAGGATCAACCTTCACAGGGATCGGCTTCAATGCTGATGGTTGGAAAACCCGCGTTGATTCTGGTTCTCCTACAGGTGTTTTGAATACTACTCGCGAATCATTTGCGCCGGGTCAAATTCAAGTTGCAGACAATCCACGTTATTACATTCGTTTGCGTGGTGAAAATTTTGCATCTGCTGATCTTGCTCTTGAAACTGGATTTGAAGACGTAACCATTTTCCAAGGCCAGCAAGTTACATTGTCATTTTGGGCTAGATCGTCAACAGATCGTGACATTCGCTTGAAGGTAATTCAGAACTTCGGAACGGGTGGTACAGTTTCGGCAGAAGTTACAACAACTGTTCTCAATCAGTTTACCCTTAATTCGGCTTGGCAGCGCGTTACAGCGACATTCACCATGCCTACCATTGCTGGTAAGATTTTGGGTACAAATGATGCTACCGATCATATTAGAATTCAGGTTGTTCTAAAAGACGGCACTATTGGTTCCGATATCGGAACTTCCTATGCTGATTTTGCTCTATTCATGTTGGAAGCTGGAAATAAGGCTACTAAATACGAATATAAGCCAAGAGATTATGAAGACACTATTTGTAAGAGATATTATCAGAAACTAACGCAAAATGCAACATATTTTGCTACGGCTGGTTCTCAAGTCCTTGCATTCACAAACAGTTTTATTGTTCCTATGCGCGTTACTCCAACTGCTACAAAGGTCAATACGGCTAACACTAACGTAAGCACCACAACCGTTACACCATTGAACGAAAAGAATTTCAAATATGCGGTTGTCTCAAGCACAGACGGTAACATTAATGCCGAATCTGTAACTGAATTCAGTGCTGATATTTTGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40e66e8377ae13b7f49b3de96b3080d34321832782ff0d9d34cd54a89941f054
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank