Protein

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Genbank accession
QDH50429.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSEQIIKVKSLPGIKRDGTQFEGDNYVDGQWVRFDRGFPRKIGGYYSISKYLSEVSRALHAYTQNNLTYVHSGSASYLENFYIQNNSTSVIYNRTPASGFTASADNMWQFDVMRKSVGADNNKIIAQVAPNLLDITSTSAGAIFTGDLTATTALAAVTLPTDGDASGGIVVLHPYLFFYGVDGYVGWSVPGDPTDLSGTGSGAANVTGQKVLRGMPLRGGPGNSPSGLFWSADALIRCSFVGGDSIFQFDTISAESSLMGANAVIEYDGVFYWAGVDRFLMFNGVVREIPNMLNKNYFFDGLNYTYRQKVFAFKVPRFGEIWWCYPRGDATECTHAVIYNVREDTWYDTALPESGRSAATSPSVFRKPLLTGVLPNSSNKYKLWVHESGTDAIDGTQQQPILSFFETADFALPTTTGESRALTVRIVEPDFVQSGDIEAVVTGRFNARSQAVDSAALTIVANPTTAQEVIRFKDQRRLLRFRFTSNCIGGDYQTGQILAHVLPGDERAYG
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55871,88720 Da
isoelectric point:5,50670
aromaticity:0,12157
hydropathy:-0,17118

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH50429.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,5285
Central domain 119 317 200 0,1417
C-terminal 318 510 192 0,6188
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-317
C-terminal
318-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RW
[NCBI] 		2591034 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH50429.1 [NCBI]
Genbank nucleotide accession
MK929790 [NCBI]
CDS location
range 36404 -> 37936
strand -
CDS
GTGAGCGAGCAGATCATCAAGGTCAAATCGCTGCCGGGCATCAAGCGCGACGGCACGCAGTTCGAGGGCGACAACTACGTCGACGGCCAGTGGGTCCGCTTCGACCGTGGCTTTCCGCGCAAGATCGGCGGCTACTACTCGATCAGCAAGTACCTGAGCGAGGTCAGCCGCGCGCTGCACGCCTACACGCAGAACAACCTGACCTATGTGCATTCCGGCTCGGCGAGCTATCTGGAGAACTTCTACATCCAGAACAACAGCACGAGCGTCATCTACAACCGCACGCCCGCCTCGGGGTTCACGGCCAGCGCCGACAACATGTGGCAGTTCGACGTGATGCGCAAATCCGTCGGGGCGGACAACAACAAGATCATCGCTCAAGTCGCGCCGAACCTACTCGACATCACCAGCACGTCGGCTGGCGCGATCTTCACGGGCGATCTTACCGCCACCACGGCGCTCGCCGCTGTGACGTTGCCGACCGACGGCGACGCCAGCGGCGGCATCGTCGTGCTGCATCCCTACCTGTTCTTCTACGGCGTTGACGGCTACGTCGGCTGGAGCGTGCCCGGCGATCCGACGGACCTGTCCGGCACCGGCTCGGGCGCGGCCAACGTCACAGGTCAAAAAGTCCTGCGTGGCATGCCGTTGCGCGGTGGTCCCGGCAACAGCCCCTCGGGCCTTTTCTGGTCCGCCGATGCGCTGATCCGATGCTCCTTTGTCGGCGGAGACAGCATTTTCCAGTTCGACACCATCTCGGCGGAGTCGTCGCTCATGGGGGCCAACGCCGTCATCGAGTACGACGGTGTATTCTACTGGGCGGGCGTCGACAGGTTCCTGATGTTCAACGGCGTGGTGCGGGAAATCCCAAACATGCTGAACAAGAACTACTTCTTCGACGGGTTGAACTACACCTATCGGCAGAAGGTGTTCGCGTTCAAGGTCCCGCGCTTTGGCGAAATCTGGTGGTGCTACCCTCGCGGTGATGCGACCGAATGCACGCACGCGGTGATCTACAACGTCCGCGAGGATACGTGGTACGACACCGCCTTGCCGGAGAGCGGACGCTCTGCGGCGACGTCGCCTAGCGTGTTCCGCAAGCCGTTGCTGACTGGCGTGCTGCCTAACAGCAGCAACAAGTACAAGCTGTGGGTCCACGAGAGCGGCACGGACGCCATCGACGGCACCCAGCAGCAACCCATCCTGTCGTTCTTCGAGACGGCGGACTTCGCGTTGCCCACCACGACGGGTGAAAGCCGCGCGCTCACGGTGCGCATTGTCGAGCCGGACTTCGTGCAGAGCGGCGACATCGAGGCTGTCGTCACGGGCCGCTTCAATGCACGCTCGCAAGCTGTTGACAGCGCGGCGCTGACCATCGTCGCCAATCCGACGACGGCGCAAGAGGTCATCCGCTTCAAGGATCAGCGCCGCCTGCTTCGGTTCCGGTTCACAAGCAACTGCATCGGCGGCGACTATCAGACGGGTCAAATCTTGGCGCATGTGCTGCCCGGCGACGAGCGCGCATACGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4ca85f0308d0ed5f1fdefd676c35ea409ca784753fd854fdcc7ef660b5e16bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank