Protein

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Genbank accession

XDJ00428.1 [GenBank]

Protein name

tail fiber

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect

Probability 0,91

Evidence RBPdetect2

Probability 0,96

Protein sequence

MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITMGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNTFSGTQNIQGDVNLLRLRNQNANNAQYIEGVDLDGSARWLVGISKNGSDAVQLYNNKYDSALTIASNISINKSLAITGQVQPSDFSNLDARYFTQTVANQRFAQLAGNNTFTGANTFTNLVVKKNANAITLQNTDAGTALYILGKRSDGTNKWYVGTDSDETRLNIYNYLTGSQVSLGTTIGINKTVQINGQVQPSDWTNIDSRYIPAATLSTIARTNAQNTFNGAQTVVSDGEGLVIKNSTQNRPLYIRGKDAANVSRWWLGVGDPNSTDVALNNSFSGTQLILGNSSASINKTLTLAGQIQPSDFSNLDARYYTQSTANSRYMLAYSSGTGTEVGDSDGIAWNAKTGLYNVTGYSGGSTRLVFQMYQGAGSTPSAQLKFNYRNGGFWYRSSRDGFGFEEDFTQIYTEKYKPTPSAIGAYTKAETDQKIAEAISDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLSVGNLPSHTHSFSATTSSFDYGTKTTNTTGAHTHSVSGSTNNTGAHTHTVGGHYGGDSIGGKPRVQVSGTEQVSSVAGDHSHTVSGTAASNGNHAHTVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA

Physico‐chemical properties

protein length:	781 AA
molecular weight:	83624,00400 Da
isoelectric point:	8,26145
aromaticity:	0,08579
hydropathy:	-0,41562

Domains

Domains [InterPro]

DC_0032
ATT
1–265

DC_0032 G3DSA:6.20.80.10 DC_1993

G3DSA:6.20.80.10
STR
159–218

G3DSA:6.20.80.10 DC_1993 G3DSA:6.20.80.10 IPR051934

IPR048388
ATT
159–247

IPR048388 IPR048388 IPR048388 IPR022246 IPR005003 IPR005003 IPR005003 IPR005003 IPR005003

XDJ00428.1

1 781

Architecture

ATT

STR

ATT

STR

ATT 1-354 | STR 355-378 | ATT 379-473 | STR 474-777 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0032	ATT	DC_0032	1	265	Novel HMM	DC_0032	N-terminal	Low	Positional only	139 proteins / 139 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	159	218	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	159	247	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
DC_1993	STR	DC_1993	242	360	Novel HMM	DC_1993	Central	Low	Positional only	126 proteins / 126 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	272	331	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	273	354	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
DC_1993	STR	DC_1993	354	777	Novel HMM	DC_1993	Central	Low	Positional only	126 proteins / 126 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	379	440	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	379	473	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
IPR051934	Unmapped	-	444	753	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR022246	RBD	DC_0194	475	584	InterPro cluster	Bacteriophage T7, Gp17, C-terminal	C-terminal	Low	Positional only	166 proteins / 166 hits
IPR005003	Unmapped	-	652	661	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	672	685	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	686	698	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	722	733	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	744	756	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XDJ00428.1

1 781

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	64	64	0,9939
Central domain	65	263	200	0,2591
C-terminal	264	781	517	0,8213

Note: Constraints were applied during segmentation.
Fixed 12 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-64

Central
65-263

C-terminal
264-781

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage PMBT20 [NCBI]	3229744	Uroviricota > Caudoviricetes >
Host	No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

8f9faba097db54e8848e4065c2721ae31b1f8fbd0e30f034c1316dd2064412d9

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7034

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence