Protein

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Genbank accession
ALP47354.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSSINLPGGGQSLPQYIEEAPVNGLLYGRKDEEWEIIPEDSLTPFPLGITPNSFDAGTGDRDAAIALRDAHASSNPSWVAYYVNNPTSSIDLVYEDVSLGGTVAERQTYTGTQWISQRIVEGIPGPVGPSGEGSIPPFASIAERDLFFSTSGNKSLLKNGLPVFVQEFAGRASSYYWRGATDPVAYDPNKFSLAAVQSGSGDLYLANAHKISSSGQNISVTNIIDNISFHSLWQTYDEGNTGTVRVRSGEVVTEYSDKSGQLTNPRWELAQMANNRTLYSVMVDFVNAYDEIDVVVYKNTDEYYQTKIFDITPGEVDVLIEPPFDIRSMDVLELELRNPNLDVVVWGNLSTGIPWNKPTTRDFTDETVVIQPDLDAVETRVSDIEANAIVTGDNVSELTNDAGYISDKDIIFQKSNNTGTNVLTLNGTGEEGTIPLSQTDENGVLFEYSSTTDNFRPLEDKPMHIKLRISIDRSGGGSNPEIITWVESSATDTTVPNAFTQETSAFRMDDLQTDRTLFLIDTILNMDSSRYYRIRLRNLNGDDFDVDTFGPFTTSSGNDIFAPAVEFMLSR
Physico‐chemical
properties
protein length:571 AA
molecular weight: 62884,55680 Da
isoelectric point:4,25266
aromaticity:0,09457
hydropathy:-0,35306

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
10–44
G3DSA:1.20.5.320
DC_1057
STR
38–548
DC_1057
ALP47354.1
1 571
Architecture
STR
STR 10-548 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP47354.1
1 571
Domain Start End Length (AA) Confidence
N-terminal 1 403 403 0,9923
Central domain 404 560 158 0,0114
C-terminal 561 571 10 0,9758
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-403
Central
404-560
C-terminal
561-571

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-ST2
[NCBI] 		1747714 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP47354.1 [NCBI]
Genbank nucleotide accession
KT919973 [NCBI]
CDS location
range 96217 -> 97932
strand +
CDS
ATGAGTTCGATTAATTTACCCGGCGGTGGGCAATCACTACCACAATATATCGAAGAAGCCCCTGTAAACGGATTACTATACGGGCGAAAGGATGAAGAATGGGAAATAATCCCAGAGGATTCATTAACCCCATTCCCACTTGGGATTACGCCAAATTCATTTGACGCAGGTACAGGAGACAGAGACGCAGCAATAGCTCTAAGAGACGCTCATGCGTCATCAAACCCATCATGGGTTGCTTACTACGTCAATAACCCTACATCATCAATTGACCTCGTATATGAAGACGTTTCGCTCGGAGGTACAGTAGCAGAAAGACAAACATACACAGGAACGCAGTGGATTTCGCAGAGAATTGTCGAGGGAATACCGGGCCCAGTTGGCCCATCAGGCGAAGGTTCTATACCACCATTTGCGTCAATTGCAGAAAGAGACTTGTTCTTTTCTACTTCGGGGAATAAGTCGCTATTGAAAAATGGGCTACCTGTATTCGTACAAGAGTTCGCAGGTCGTGCAAGCTCATACTATTGGCGCGGCGCAACCGACCCTGTAGCATATGACCCAAACAAATTCTCGTTAGCGGCTGTACAGTCGGGAAGCGGTGACTTATATCTTGCAAATGCACACAAGATATCATCATCAGGTCAAAACATCTCAGTCACAAATATAATTGACAATATAAGCTTTCATTCATTATGGCAAACGTATGACGAGGGCAACACTGGTACAGTTAGAGTTCGCTCAGGGGAAGTGGTTACTGAATATTCTGACAAATCAGGGCAACTAACCAACCCACGATGGGAACTCGCGCAGATGGCAAACAATCGCACGCTATACTCAGTCATGGTTGATTTTGTCAATGCATACGATGAAATTGATGTTGTCGTTTATAAAAACACAGATGAATATTACCAAACTAAAATATTCGATATTACACCGGGCGAAGTTGATGTATTAATCGAACCACCGTTTGACATTCGTTCAATGGACGTGCTTGAGCTTGAGTTGCGCAACCCGAACTTAGATGTTGTAGTATGGGGTAACTTATCAACAGGAATCCCATGGAATAAACCAACAACACGTGATTTTACCGATGAGACTGTTGTGATTCAACCTGATTTAGATGCAGTCGAAACAAGAGTAAGTGACATCGAAGCAAACGCGATTGTCACCGGGGATAATGTTTCTGAACTGACAAATGACGCGGGATATATTAGCGACAAAGACATCATTTTCCAGAAGAGCAATAATACTGGAACTAACGTGTTAACGCTAAACGGGACAGGTGAGGAGGGTACTATCCCACTATCGCAAACCGATGAAAATGGTGTGTTATTCGAATACTCGTCAACTACTGATAATTTCAGACCACTTGAAGATAAACCAATGCACATTAAACTTAGAATAAGTATTGATCGTTCTGGCGGAGGGTCAAACCCCGAGATCATAACGTGGGTTGAATCATCAGCGACGGACACAACAGTTCCTAATGCATTTACACAAGAAACATCAGCATTTCGAATGGATGACCTGCAAACAGACCGTACATTATTTTTAATCGATACGATTTTAAATATGGACTCAAGTCGTTATTATCGCATAAGACTTCGTAATTTAAACGGCGACGATTTTGATGTTGATACATTCGGCCCGTTTACAACAAGTTCGGGTAATGATATTTTTGCACCCGCAGTTGAGTTTATGCTTAGTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
530b18cf7c56d21fece6fe1ead766d6a99926af3dece128ca2271df137b12707
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50