Protein

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Genbank accession

XCD09646.1 [GenBank]

Protein name

tail spike

RBP type

TSP

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MDYTPDIQRDINNIQIDVTKFGVKGDGVTDDTAAMNRALKWIKDNGYDTAYIPSGTYMIDGVNRSTQYNVWRNGGIVVPSDVNIIMDYDTVIKVIPNDAWGYSAFYVGRASNVTIRGGQIIGDKANHTYNTTLNKETNEWGFGICIEASDNVIVEGVRIRECIGDGVIISPLGLATDPNYRTSTNVTVRKCVIDGSRRNNISVTGCEYIILEGNTLTNAGDGGVTPKFGIDIEGYGEGDIDYEFPLNITAKDNYVAGSRKAAICNFNGYGVIITNNHVDSYLSYGFGTETVISDNVVKKLDSYASEIDTGVTGLGVSNGLPGNNSIVSNNTVTGFSTGIDVRGDDVLVSGNKVYQYDNVGIATWSANKIVVSGNVVSGFVTTSDATKYGQGVRLFTGSDITVMGNKISETKLGVYTQSTSDVLVKDNYVKRVGIGIQVGGTSAVVEGNTLIQGDISDLGYKAEYAIQATGTSLKAVIRGNYIQQFTGTPVYSYKATCKVLDNTIEGVVSYSAIQLNGDKHYVVGNKISMNRSSTTVYGIFLEYSTDSYIMDNTMYSISGYTMKNAITTNTTSTGTKILANTIINGTIASHSTDTVTGNQLI

Physico‐chemical properties

protein length:	601 AA
molecular weight:	64528,21140 Da
isoelectric point:	4,87431
aromaticity:	0,08652
hydropathy:	-0,14459

Domains

Domains [InterPro]

IPR012334
STR
15–378

IPR012334 IPR012334 IPR006626

IPR011050
STR
15–298

IPR011050 IPR011050 IPR006626

IPR024535
ENZ
16–62

IPR024535 IPR039448 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR012334
STR
20–378

IPR012334

IPR006626
Unmapped
110–148

IPR006626 IPR006626 IPR006626 IPR006626 IPR039448

DC_1312
RBD
357–576

DC_1312

XCD09646.1

1 601

Architecture

STR

RBD

STR 15-536 | RBD 537-576 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	15	378	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	15	298	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR024535	ENZ	DC_0410	16	62	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR012334	STR	IPR012334	20	378	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR039448	ENZ	DC_0799	68	224	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	110	148	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	149	171	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	183	205	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	206	234	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	245	267	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	268	290	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	320	510	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	322	342	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	323	481	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	343	365	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_1312	RBD	DC_1312	357	576	Novel HMM	DC_1312	C-terminal	Low	Positional only	37 proteins / 37 hits
IPR006626	Unmapped	-	366	396	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	380	536	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	397	418	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	419	440	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	472	494	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	517	543	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	544	570	InterPro	Parallel beta-helix repeat	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XCD09646.1

1 601

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	27	27	0,9356
Central domain	28	590	564	0,9978
C-terminal	591	601	10	0,1502

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-27

Central
28-590

C-terminal
591-601

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacillus phage Adastra [NCBI]	3143958	Uroviricota > Caudoviricetes > Herelleviridae > Okubovirus >
Host	Bacillus subtilis [NCBI]	1423	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

ed468209065ce112f388326da552bfc555118ec0abe1d13f1827ab52a10313a3

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8992

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence