Protein

View in Explore
Genbank accession
XLQ30448.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGSLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVVTDESNIRFHVNSMAGTPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIFSGTMPFAPIASLSDYSQAPLTVYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPSWNGQTVWRSGNFDPVTKVDLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFERGGSIFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYDNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102957,12580 Da
isoelectric point:5,53904
aromaticity:0,10477
hydropathy:-0,25197

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1788
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–700
DC_1788
XLQ30448.1
1 964
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-809 | RBD 810-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaCCP2
[NCBI] 		3376761 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ30448.1 [NCBI]
Genbank nucleotide accession
PQ492278 [NCBI]
CDS location
range 50058 -> 52952
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATTCCGCAGACCTCTTCCACTGGTTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTCATCGCTTCTCAAAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGTATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCGTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTATCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACTACGCCGTGGTTCGCCAATCTGGAGTTGTCTGACGCTCGGCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTACTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCTCCCTTTGGCAGAACACCACTGCCGATCAGCCTGGTTGGAAATTCACCTTCGCACAAGGTGTGGACGCCAACAACAACGCGGTTATCGCAGTCAATACCACCAACCCTGACGGCTCTTATCGCTCGCAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTCCCTTGGGACTCCGGAAACTTTGATCCGGCCACCAAGCTCACTGTCGGGACTACCAACAACATTTCGGGACCGACCGGAATTCGCAATACCACCAGCAATACCGGAAATATGAACACATGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAGCCCTTCAAATCTTCGGTAGAGGGGGTGGCGAGCCTGCGGCCATCTACTTCGACAACTCCCAAACCGGCTGGTATTTGGGCATGGACAAGGACGGTCAGCTGAAGCGAGCAGGCTGGTCGCTCGGCAATAACTCCTATGTGGTCACCGACGAGTCGAATATTCGTTTCCACGTGAATTCCATGGCTGGCACTCCGGTATGGGGCGGAAACGAATTCTGGGGGCCGTGGAACTTCAACCCGAACACCAAGTTGACCATCAAAGCCGGCACGCAGGAGACTAGCAGCACTGCGATATTCAGCGGAACCATGCCGTTCGCCCCAATCGCGTCTCTGTCCGACTATTCCCAGGCGCCATTGACGGTTTACAACTCGCCGACTGGTCCATCTGCTAAGCCTGCCGTTATCGCGTTCATTCGCCCTGGCAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAGTTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCGGCCAACCCGACCGCGCCGTCCTGGAACGGCCAAACCGTTTGGCGATCCGGAAACTTTGATCCGGTGACGAAGGTGGATTTGAACGCCGCGAACGCCACCAACGGCAACATGATCTTCAACCGCATTTCTGGAACTGGTAGCGGCATAGCTTCGTCCGGTCGAGTTGGCGCAATCAACCTGCAGAATGGGGCGCATTCGGGGCAAGCGGCCGCAGTCACTTTCGAGCGGGGCGGCAGTATCTTCGTCAACTTCGGCTTGGATACCGACAACGTTCTCAAAGTAGGTGGCGGAAACCTGGGGGCAAACGCCTATCCGGTCATCCACGCCGGGAACTACGATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTATGGCATCTTTGCGGTTTTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGTTGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCTGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
215c71e6ffdfa4798d1bc3f61de1c617777301d487bb4360ce2c5641a7cc1228
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2998
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages PaCCP1 and PaCCP2 capable of infecting diverse multidrug resistant strains of Pseudomonas aeruginosa Parra,B., Sandoval,M., Arriagada,V., Amsteins,L., Aguayo,C., Opazo,A., Dechesne,A. and Gonzalez,G. 2024-11-30 — GenBank