Protein

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Genbank accession
QPZ53422.1 [GenBank]
Protein name
putative tail tubular A
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MASVVDICNSALNLLGASTISALTDDSKNARLCNQRYEPIRNRVFRSHAWNCLTKRVQLAKDSAAPVVEYTNQYTLPADCLRVLKIHTGVTDSIASAIDYAVEGRKIKTDEGTVYLVYVAIDTDPNNYDTYLQESISHQLAADIAYAVTNNATLAKNYMERADERLREARFIDATENALGTIESSEFTDARL
Physico‐chemical
properties
protein length:192 AA
molecular weight: 21332,63060 Da
isoelectric point:5,08683
aromaticity:0,07292
hydropathy:-0,27552

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC028P
[NCBI] 		2796519 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53422.1 [NCBI]
Genbank nucleotide accession
MW273921 [NCBI]
CDS location
range 28385 -> 28963
strand -
CDS
ATGGCATCAGTAGTAGATATTTGTAATTCAGCTTTAAACTTATTAGGAGCATCAACAATCTCAGCATTAACTGACGATAGTAAAAATGCGAGATTATGTAACCAAAGATATGAACCAATAAGAAATAGAGTATTTAGATCACATGCTTGGAACTGTTTAACTAAAAGAGTTCAATTAGCAAAAGATAGTGCAGCTCCAGTTGTTGAATATACTAATCAATATACACTTCCAGCTGATTGCCTTAGAGTTTTAAAGATACATACTGGAGTTACAGATAGTATTGCATCAGCTATTGATTATGCAGTTGAAGGAAGAAAAATCAAAACAGACGAAGGAACTGTTTATTTAGTTTATGTTGCTATTGATACAGATCCTAATAATTATGATACTTATCTTCAAGAAAGTATTTCACATCAACTAGCAGCAGATATTGCTTATGCTGTAACAAACAATGCTACTCTTGCTAAAAATTATATGGAGAGAGCAGATGAAAGATTAAGAGAAGCAAGATTTATAGACGCAACAGAAAACGCATTAGGAACAATCGAAAGCAGCGAATTTACTGATGCAAGATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
57baf465ec004e9c3a234fc2312f49d8766f56053eb4cbfc2c736cab50e91173
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank