Protein

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Genbank accession
QBJ04635.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPNIMKPTGINSIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGVIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDKHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLATLVPPATETVSGVMSIATTIETEAGTNDAKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSATFLKAANNLSDVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARINLGLTGMATTDPAAVVMKADNLAGLADPATARSNLGLGTASTKDVGDFLSSGANLSDLTNVQSARNNLGLKGGATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWTNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52999,87000 Da
isoelectric point:6,60346
aromaticity:0,07214
hydropathy:-0,20301

Domains

Domains [InterPro]
DC_0043
STR
1–324
DC_0043 G3DSA:2.60.40.3940
DC_0362
RBD
322–499
DC_0362
IPR054075
RBD
416–495
IPR054075
QBJ04635.1
1 499
Architecture
STR
RBD
STR 1-324 | RBD 325-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JHP
[NCBI] 		2544985 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ04635.1 [NCBI]
Genbank nucleotide accession
MK443265.1 [NCBI]
CDS location
range 3526 -> 5025
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGAATCAACTCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGCGCTGTGAAAGTTGGACTGGGCTGGGTTACGGAACTTCCTCCGTACCAGACTGCCAACTTTATCGAGTACAAACAAGACCTGTTTAACGCTCACGTTAACCAACATGGTATTCCAGAGTGGGACAGCGTTACAGAGTATCAGGGCAATCTGAGCTATACTCAGGGCGCTAACGGAGTTATCTATAAGTGCCTTAGGACTCACTCTGATAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGAGAGTGGCGTTTGAGGATGCAGGGGAAGCGGCCAAGGTTCAAGCCAACCTAGACAAACACGTAACCAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGATGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTCTTCAGCGTTGCCACTGCCACACAGCCAACTCACGCTATTCCTTTGAGCCAATTGGCCACTCTCGTCCCTCCGGCTACAGAGACCGTTAGTGGCGTCATGTCGATTGCAACGACAATCGAGACAGAGGCCGGCACTAATGACGCTAAAGCTGTCAGCCCTCTGAAAGCCGCTCAGGTGTATCTGAAAAAGAAAGATAACCTATCCGGGCTGTCTAACGTAACTGCGGCTAGAGCTAACCTAGGCCTATCTGACACCGCTACAATGCCTTCGGCTACGTTCCTGAAGGCTGCCAATAACCTGTCTGATGTTCCTAACAAGGCATTGGCTAGGTCTAACCTTGGTATCACAAGCAGTGCCACTCAACCAGAAACCTACTTCCTGAGAAGTGCTCAGAACCTTGCAGATGTTCCCAACAAAGCCCAAGCAAGGATCAACCTAGGGTTGACGGGGATGGCTACAACAGACCCTGCGGCTGTTGTCATGAAGGCTGATAACCTTGCGGGATTGGCTGACCCAGCTACGGCACGGTCTAATCTGGGGCTGGGGACGGCATCTACCAAGGACGTGGGAGATTTCCTATCGTCTGGAGCCAACCTTTCCGACCTGACAAACGTTCAATCCGCCAGAAACAATCTGGGCCTGAAGGGCGGGGCTACACTCGATGTGTGGGGGCTCCCTGCGAATACAACTGCCATGGACTTCCAGTCTAGTCAGTCGGATATCTCCAGAGGGTGGGCTAGACTTCCAAACGGTCTCCTGCTACAATGGGGAACTGGTCCCGGTCTGTCTGATGACACAAGGACGAATATTCAACTCCCTGTGCCCGCTCGTATCCTGAACGTGCAAGTTACCGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGACCAACACAGGGTTTAGAGTTAGCTGTAACTGGGGCAACTGGTCTTACCCGTTCAACTGGTTTGCTATCACTTCCACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fae3b80e2315cc278019887f2861ae60be2ab6e746e14c5098bdc19e492fdea4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome characterization and animal model rescue studies of bacteriophage JHP Alvi,I.A., Asif,M., Tabassum,R., Abbas,Z. and Rehman,S.U. 2017-04-18 — GenBank