Protein

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Genbank accession

APD23401.1 [GenBank]

Protein name

PblB

RBP type

Evidence RBPdetect2

Probability 0,73

Protein sequence

MLYLLNEDVRTVRWNGESLHEATSAIVKETMNGDFTLTVKYPISDSGIYQLIQEDMLIKAPTPVLGAQLFRIKKPVEHNDHLEITAYHISDDVMQRSITQMSVTSQSCGMALSRMVQNTKTALGDFSFNSDIQDRRTFNTTETETLYSVLLDGKHSIVGTWEGELVRDNFAMTVKKSRGENRGVVITTHKNLKDYQRTKNSQNVVTRIHARSTFKPEGAEKETTIRVTVDSPLINSYPYINEKEYENNNAKSVEELQKWAQAKFSNEGIDKISDAIKIEAYELDGQVVHMGDTVNLKSWKHNVDVFKKAIAYEFDALKEEYISLILDDKAGAGGSRTSGGLSSAADAILGVTESAQEVALEKALQNADLDFDHKAGLLRQEISDGIELARAKAEEVKQELSDTINQRFNSFDNGPLKEAKRKAEEALRNAGASSSLAQESKRIVLDSVARLEAFKSQTTSAQTALSGDLDALKRTIVNDIRPKQAQVEAEIAKQVEALVQTKKELSGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELSGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEVLSRTKNELAGVKSAQATYEETTTRRLSELTNLSNGKASKSELTQTAEELASRIASVQAGSSRNYFRNSRSRTFTTGGQAVYDYRTFIVPDFWKNSDRFKRDYVRISFDVTFPVALVNDMPAMVHFSAHPWYAYRNLIFKGGTVERQHFEFTIDLSSSSEDYQTNNVFIRFGTNYGFPAGLQVVIENAMLSVGNYFPAYQPAYEDQEDRVSVVESNFKQRADSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASRIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTIWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLDAGVRSLTEGLRTKVDISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNIEPDFSSRLYQKVTFSAWVKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQAIAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGADNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLVRKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKVAKGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRPGLHFYHDSQDVANFFGIQQSFAFDGVRGEKVSVSLLVSKDGGDSNSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDTDEAIRSVQSQLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTAEKLKVDNALIRKLTANDAFIDQLISKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA

Physico‐chemical properties

protein length:	2210 AA
molecular weight:	246066,16950 Da
isoelectric point:	7,57513
aromaticity:	0,08145
hydropathy:	-0,53344

Domains

Domains [InterPro]

DC_1274
ATT
1–581

DC_1274 Coil DC_0720 G3DSA:2.60.120.260 DC_0720

IPR007119
Unmapped
28–321

IPR007119 Coil Coil Coil DC_0720 IPR008979 IPR030392

IPR047149
Unmapped
388–1196

IPR047149 G3DSA:2.60.120.260 IPR030392

DC_0909
STR
570–812

DC_0909 DC_0976

APD23401.1

1 2210

Architecture

ATT

STR

RBD

ATT 1-581 | STR 582-1417 | STR 1511-2177 | RBD 2178-2210

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1274	ATT	DC_1274	1	581	Novel HMM	DC_1274	N-terminal	Low	Positional only	124 proteins / 124 hits
IPR007119	Unmapped	-	28	321	InterPro	Phage tail spike protein, N-terminal domain	-	-	-	-
Coil	Unmapped	-	379	406	Coils	Coil	-	-	-	-
IPR047149	Unmapped	-	388	1196	InterPro	Kinesin-like protein KIF11-like	-	-	-	-
Coil	Unmapped	-	560	580	Coils	Coil	-	-	-	-
DC_0909	STR	DC_0909	570	812	Novel HMM	DC_0909	Central	Low	Positional only	53 proteins / 53 hits
Coil	Unmapped	-	636	656	Coils	Coil	-	-	-	-
DC_0720	STR	DC_0720	771	1000	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
Coil	Unmapped	-	944	964	Coils	Coil	-	-	-	-
DC_0720	STR	DC_0720	987	1417	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1229	1398	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_0720	STR	DC_0720	1511	2177	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
IPR008979	STR	IPR008979	1666	1823	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1667	1830	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR030392	CHP	DC_0088	2116	2169	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	2116	2209	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
DC_0976	RBD	DC_0976	2166	2210	Novel HMM	DC_0976	C-terminal	Low	Positional only	60 proteins / 60 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage IPP43 [NCBI]	1916182	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptococcus pneumoniae [NCBI]	1313	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

APD23401.1 [NCBI]

Genbank nucleotide accession

KY065483 [NCBI]

CDS location

range 24022 -> 30654
strand +

CDS

TTGCTTTATCTACTTAATGAAGATGTAAGAACTGTTCGATGGAACGGGGAGTCACTTCATGAAGCGACTTCGGCGATTGTGAAAGAAACTATGAATGGCGATTTTACCTTGACTGTGAAATATCCTATTTCTGATTCTGGTATTTACCAGCTTATCCAAGAAGATATGCTGATAAAGGCTCCGACTCCTGTCTTAGGAGCGCAGCTATTTCGTATCAAGAAACCTGTTGAGCACAATGACCATCTGGAAATCACAGCCTATCACATTTCAGATGATGTGATGCAACGATCTATCACACAAATGAGTGTGACTAGTCAGAGTTGTGGCATGGCTCTTTCTCGCATGGTACAAAACACCAAAACAGCTCTTGGAGACTTCTCATTCAACAGTGATATCCAGGACCGTAGGACATTCAACACGACTGAGACAGAAACCCTGTACTCTGTATTGCTGGACGGCAAGCATAGTATCGTCGGAACGTGGGAAGGCGAGCTGGTGCGTGATAACTTTGCGATGACTGTAAAGAAGAGTCGTGGTGAGAATCGTGGTGTTGTTATTACAACACATAAGAATCTGAAGGACTACCAACGAACCAAAAACAGTCAAAATGTTGTTACAAGGATTCATGCTCGATCCACATTTAAGCCTGAAGGTGCTGAAAAGGAAACAACTATCAGAGTGACTGTTGATAGTCCTCTTATTAATTCTTATCCTTACATAAACGAAAAAGAGTATGAGAACAACAACGCAAAATCCGTTGAAGAGTTGCAGAAGTGGGCACAGGCTAAGTTCTCAAATGAGGGCATTGACAAGATCTCTGACGCTATCAAGATTGAAGCTTATGAACTTGATGGGCAAGTTGTTCACATGGGTGATACGGTCAATCTCAAGAGCTGGAAACATAATGTTGATGTATTTAAGAAAGCTATTGCTTATGAGTTCGATGCCTTAAAAGAAGAATATATCTCTCTGATTCTCGATGATAAGGCAGGAGCTGGTGGTTCTAGAACATCTGGTGGCTTATCTAGCGCAGCGGATGCCATTCTTGGAGTAACAGAATCTGCACAAGAAGTTGCCCTTGAAAAGGCTCTTCAAAATGCTGACTTAGACTTTGATCATAAGGCTGGATTGCTTAGACAGGAAATTTCTGACGGCATCGAACTTGCCAGGGCCAAGGCGGAAGAAGTCAAGCAAGAACTGTCTGACACTATCAATCAGCGCTTTAATAGCTTTGACAACGGGCCATTGAAAGAAGCTAAGCGCAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTAGTTCTCTTGCTCAGGAATCCAAGCGGATTGTGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGACGCTCTGAAACGGACTATCGTGAATGATATTCGACCGAAGCAAGCACAGGTTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTGTTCAGACCAAAAAAGAACTGTCTGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCTCAGACGGCTTTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCAAACGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAGAATGAACTGTCTGGCGCAAGTACCCTACTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCTCAGACGGCTTTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCAAACGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGTACTTAGTCGGACTAAGAATGAACTGGCTGGCGTGAAGTCAGCGCAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGTCCAATGGTAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTGGCTAGTCGGATTGCGAGTGTGCAGGCAGGTAGTTCACGGAATTACTTCAGGAATTCACGTTCAAGAACGTTCACAACAGGAGGTCAAGCGGTATACGACTATCGAACATTCATAGTTCCTGATTTCTGGAAGAACAGTGACAGGTTCAAGCGTGATTATGTTCGCATATCTTTTGATGTGACTTTCCCTGTCGCCCTAGTAAATGACATGCCTGCTATGGTGCATTTTAGTGCTCATCCATGGTATGCCTACAGAAACTTAATTTTTAAAGGTGGAACTGTCGAACGCCAACATTTTGAGTTTACGATTGACTTGTCTAGTTCTTCTGAGGACTATCAGACTAATAATGTGTTCATTCGTTTTGGTACTAATTATGGATTTCCTGCTGGTCTGCAGGTCGTCATTGAGAACGCTATGTTATCGGTTGGTAATTATTTTCCAGCCTATCAACCAGCGTATGAAGACCAAGAAGACCGTGTCTCAGTAGTCGAATCCAACTTTAAGCAGCGTGCTGATTCACTCGAAGCTGGTGTAAGCCGTCTGACTGAAGGCCTTAGAACCAAAGCGGATATCAGCTCACTCAATGTGACTGCTGAGAATATCCGGCAATCTGTGAAGAGCCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCCAGCAAGTCAGAACTTACGCAGACAGCTGAGGAGCTAGCTAGTCGGATTGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAACTCACTATTCAAGCAGGATATTTCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGTAAGTATCTTGGACACAAGGCTCTTAAAATTATAGGTCTGAATCCATCTGGTCGTGATGGAGGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGTACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATGCTAAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAAATTAAGCGATATGTTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCAGACCACAAATGAATGGTTGTTCAATTTCAACCAGGAAGGAACCATTTGGATTTGGATGCCGAAGTTTGAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTAGAATCGACCTTTAAACAACGAGCCAACTCGCTCGACGCTGGTGTGAGAAGCTTGACTGAAGGGCTTAGAACCAAAGTGGATATCAGCTCACTCAACGTGACTGCTGAAAATATCCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCAGATAAGACTTTAGTTGTATCTGAAGCTGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGACGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACATTGAACCAGATTTCAGCTCAAGGTTGTATCAAAAAGTTACTTTTAGCGCTTGGGTCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAAGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGATTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAAGCGATAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAAAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGCCTTTCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAATAAACAAGGCGCAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGTGCGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAGGTTGCCAAAGGTGGTCGAAATTATATCAGAAATGGTCAATTTAAGAACGGTTCGAAAAACTGGCTTGAATATCAATCTGTTAATTTTGGTTTGAATTTCAACTATCAACACTCTCAAAATCCTAATAATCGAAATCGTCCAGGACTACACTTCTATCACGATTCTCAAGATGTTGCTAATTTTTTTGGAATTCAGCAATCTTTTGCATTTGATGGTGTTCGAGGTGAGAAAGTGAGTGTATCTCTTCTTGTTTCGAAAGATGGTGGCGATAGCAACAGTGGCTTGAAAGTCGCTTTGCACTACATCAAAAACAAAAACATTATTGGGCAAGAGTGGCAAAATATCCCAAGTCCACAAATAACATCGAAGTATAAGCGTTTTACATTTACGTTTACTTTATCAGACGATGTAGAGAATCTGAATTTGATGTTGTTTGGTGAAAAAGGGAAGACCATCAACCTCTATGTTACAGATGTTCAACTCGAAAGAGGTTCTGTCGCGACGGATTACAAAGAAGCTCCTGAAGACACGGACGAAGCGATTCGCTCTGTTCAAAGCCAACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAAGCGGTAACTGCTGAGAAGTTGAAAGTTGACAATGCGCTTATTAGAAAATTAACTGCAAATGATGCTTTTATTGACCAACTGATATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGCTCAACCTTTCTAGAAGCCTATCAAGGCCGAATCGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGTATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGACAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTACATATCGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Tertiary structure

PDB ID

f29a0f18d9e01a7df08bb80efe044964e085f393eb6c546ea33d3a3bbdf7a7c5

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5821

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence