Protein

View in Explore
Genbank accession
XCO38448.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVSDDSRRLLSNITEYRYVSKTRVKLLVSTTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKVVRLAPGENGTDAVNKNQLDTTLGEAGGILSQVKEVQGDIEEYIQKFGDDSAMVRGVNWVYNGGSAIGGETSFIIDKEAPVFAVPYIEINGSRQFRDWQYEYDPATKRVTLVKPLEAGDFVVCLTTENKLPLEDLLASTGGAASIGKAGGGTVQDGLDATIHGTDVHRDTVTPGKLDTLLVYNGTNAGRDLRGHEFVMPHGTFSATRIMRTRGIPAAEPKYTSFTWRGQGSSFTKLVHPATSGAGDIAFMDYLKDVTMSGFMMDNTPLGMGTSNTNTKNGQMWIRHSSDSYFDDLRFAGADALTFCLDHCKNIYSTNLKVDYQLRYPTGNGKSPLIVGDYSEQCMFIGGYVKTVSPDGAIKYSGDLADNDQADDTKWAFINLYGLTYEQKPNSNACMWQEGEGAPSNAHFIGMNYINNGVGHGVSEKAVGTDIGSTFRQAQVRAVWNRAEYISIGGHFIDNDAKYPGGTGGAGTSATGAVHNDNAKFTSLVGDYFRGNFVDYTDYTGASSVNPENSTHITNAKLTSGIRTFYNSNSQHLAIVNCQLAATASLSGGGNSRLHVSVVASHCVGSLGQFGFTHAETYLDVINSTFTAAGSTKAVITQSGAGRISFANSTFRDYVRVVDGSQSKVTFHNCTFYTCTFTEDDRKARYVNCQFISCTDAPDAFGLSFAADSLDRPSSLRVNVTLTAGGSYTFPSWVLQGRGAYFINVGGNGANLPACAGIIGKGSAASSGVWTPQWESTAGNIVVSWPSNGNITVTATVAGNYTIGVH
Physico‐chemical
properties
protein length:903 AA
molecular weight: 97315,91040 Da
isoelectric point:5,55427
aromaticity:0,09745
hydropathy:-0,27043

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604
DC_0778
STR
1–900
DC_0778
XCO38448.1
1 903
Architecture
ATT
STR
ATT 1-127 | STR 128-900 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38448.1
1 903
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,9891
Central domain 297 801 506 0,9928
C-terminal 802 903 101 0,9641
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-801
C-terminal
802-903

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146017
[NCBI] 		3232197 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38448.1 [NCBI]
Genbank nucleotide accession
PP889467.1 [NCBI]
CDS location
range 36179 -> 38890
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTACCCAACAGGGTCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTGTCGGACGACAGCCGCAGACTGTTAAGCAACATCACTGAGTACCGCTACGTGTCCAAGACCAGAGTCAAACTGCTGGTGTCGACCACAGGGTTCGACCGTGTGGAGATTCGACGGTTCACATCGGCATCAGAGCGAGTGGTTGACTTCAGTGACGGTTCTGTATTGCGGGCCAACGACCTTAACGTATCCCAGCTACAATCTGCGCATATCGCTGAAGAAGCACGTGATGCTGCACTTCTGGCAATGCCTGAAGATGACGCTGGTAACCTCGATGCCCGTAACCGTAAGGTTGTGCGGCTGGCTCCCGGTGAGAACGGCACCGACGCTGTCAACAAGAACCAACTGGACACCACCTTGGGTGAGGCCGGAGGCATCCTATCTCAGGTCAAAGAGGTACAGGGCGATATTGAGGAATACATTCAGAAGTTCGGAGACGATAGCGCTATGGTACGTGGCGTAAACTGGGTTTATAACGGTGGGTCTGCCATTGGCGGAGAGACCTCCTTTATCATCGACAAGGAAGCACCAGTGTTCGCTGTTCCGTACATCGAGATAAACGGAAGTCGTCAGTTCCGAGACTGGCAGTACGAGTATGACCCTGCAACCAAGCGTGTCACTCTGGTTAAACCTCTGGAGGCTGGAGACTTCGTTGTGTGTCTAACCACCGAGAATAAGTTACCTCTGGAAGACCTTCTGGCCAGCACTGGCGGTGCCGCTTCAATTGGTAAGGCTGGTGGCGGTACGGTTCAGGACGGTCTTGATGCAACGATACACGGTACCGATGTCCACCGTGACACTGTGACTCCCGGCAAACTAGACACACTCCTTGTGTACAACGGGACTAACGCTGGGCGTGACCTCCGTGGCCATGAGTTCGTAATGCCACATGGCACATTCTCCGCGACTCGCATCATGAGGACTCGTGGTATCCCAGCAGCGGAGCCTAAGTACACTTCGTTCACTTGGCGTGGTCAGGGTAGTTCATTCACAAAGTTGGTCCACCCAGCAACCAGTGGGGCTGGTGATATCGCGTTCATGGATTATCTAAAGGATGTCACGATGTCTGGCTTCATGATGGATAACACCCCGCTAGGCATGGGGACGTCGAACACGAACACTAAGAATGGGCAGATGTGGATTCGCCACTCTTCTGACTCGTACTTTGATGACCTGCGATTCGCTGGCGCTGACGCCCTCACGTTCTGTCTGGACCACTGTAAGAACATCTACTCGACAAACCTCAAGGTAGACTATCAGCTTCGCTATCCGACTGGTAACGGTAAGTCCCCACTAATCGTAGGTGACTATTCGGAGCAGTGTATGTTCATCGGCGGCTACGTTAAGACCGTTTCACCTGATGGGGCCATAAAATACTCTGGGGACCTCGCAGACAACGACCAAGCGGATGATACCAAGTGGGCCTTTATCAACCTGTATGGCTTAACCTACGAGCAGAAACCGAACTCGAACGCCTGTATGTGGCAGGAGGGTGAGGGGGCACCGTCTAATGCACACTTCATTGGTATGAACTACATCAATAATGGTGTGGGACACGGTGTGTCTGAGAAAGCTGTAGGAACAGACATCGGGTCTACCTTCCGTCAGGCTCAGGTGCGTGCTGTATGGAACCGTGCTGAGTACATCTCAATAGGTGGACACTTCATTGACAATGATGCTAAGTACCCCGGTGGTACTGGTGGTGCTGGTACTTCGGCTACTGGTGCTGTTCACAACGATAACGCCAAGTTCACCTCTCTGGTTGGGGATTACTTCAGAGGAAACTTCGTGGACTATACGGACTATACAGGGGCATCAAGTGTTAACCCAGAGAACTCCACCCACATAACAAACGCAAAGTTAACATCCGGCATTCGTACATTCTACAACAGTAACTCTCAGCATTTAGCTATAGTGAACTGCCAGTTAGCGGCTACCGCTAGTCTTAGCGGAGGTGGAAACAGCAGACTACATGTGTCCGTTGTGGCATCTCACTGTGTTGGCTCTCTGGGGCAGTTTGGCTTCACACATGCTGAGACGTACCTTGACGTTATCAACTCTACCTTCACGGCTGCCGGTAGTACTAAGGCGGTGATTACCCAGTCAGGCGCTGGTAGGATCTCGTTCGCTAACTCTACGTTCCGTGATTATGTGCGCGTGGTGGACGGCTCGCAGTCCAAGGTTACCTTCCACAACTGTACATTCTACACTTGTACTTTCACTGAGGACGACCGTAAGGCTCGCTACGTTAACTGCCAATTCATCTCGTGCACTGATGCTCCAGACGCCTTTGGCCTTAGCTTTGCGGCAGACTCTCTGGACCGTCCAAGCTCACTGCGAGTTAACGTTACGCTGACTGCTGGTGGTAGTTACACGTTCCCGTCTTGGGTACTCCAAGGCCGTGGTGCTTACTTCATCAACGTTGGTGGTAATGGTGCCAACCTTCCTGCCTGCGCGGGTATCATTGGCAAGGGCAGTGCCGCGAGCAGCGGTGTTTGGACGCCTCAGTGGGAAAGTACCGCAGGTAACATTGTCGTGTCTTGGCCGTCAAACGGTAACATCACGGTTACGGCTACGGTAGCAGGTAACTACACAATCGGCGTTCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b49d8f95aab0af5be387c2dd09ffe59653cce14c256f690aed2899824b916aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank