Protein

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Genbank accession
YP_008770664.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MGNATRSDNLGLYSWESQDRLSESIPQVSSNFQALDEILSRAWIDIKSYGYDAKGNYNLSTGNGTDDAPAFQKALDRAQNRTSSVTIFVPDGTYRLGSELRIYSNTSIIMSPNATLVRDHSKYLLFNGVRAADGGSPISGYNGDGNILIQGGTLTGQGNKQTDKASIVHFGHAQNITFDNVTLKDCSNSHHIEFNACKDVYVKNCNFLGWYGTVDTYNEAIQLDLATPELTTVAGGDYTPCKNVYIDNTYFGKSTTAGSKPIGRGIGSHSGAINRWHENVHITNCTFDSTVEWACRAYAYKDFYFTNNQIINCGRGVNVRSNISTDEKDTIDANTGAQTGKSQNVARYVIANNTFGGSMTGGRAIEIYGEETGRIYYPIVTGNTINVTSVTTGEMVYLNYVRYATVTGNNVSGDSKATCIGLNGNTTEVTIGNNICAFGDRGIAVYGANVVMQNISILGNTIRGMQRSGIHLDGIDGFSCVGNTVFDCNKAGGDENHIRVVVGNKNGTVSGNLCTVACPTSIYVSNTNSRINVTGNVLSGGLANNSSGGASSNNI
Physico‐chemical
properties
protein length:555 AA
molecular weight: 59420,90440 Da
isoelectric point:5,94436
aromaticity:0,08468
hydropathy:-0,31694

Domains

Domains [InterPro]
DC_0968
ATT
1–41
DC_0968 IPR011050 IPR006626 IPR006626 IPR006626
IPR012334
STR
44–437
IPR012334
IPR024535
ENZ
59–218
IPR024535 IPR006626 IPR011050
IPR006626
Unmapped
197–218
IPR006626 IPR006626 IPR006626
DC_1312
RBD
419–555
DC_1312
YP_008770664.1
1 555
Architecture
ATT
STR
ATT 1-41 | STR 42-555
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008770664.1
1 555
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9788
Central domain 48 544 498 0,9929
C-terminal 545 555 10 0,3987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-544
C-terminal
545-555

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Glittering
[NCBI] 		2884421 Uroviricota > Caudoviricetes > Ehrlichviridae > Andromedavirus glittering >
Host Bacillus pumilus
[NCBI] 		1408 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008770664.1 [NCBI]
Genbank nucleotide accession
NC_022766.1 [NCBI]
CDS location
range 18924 -> 20591
strand +
CDS
ATGGGTAACGCTACTAGATCAGACAACTTGGGCTTATACAGTTGGGAATCACAAGACAGACTTTCCGAGTCTATCCCTCAGGTAAGCTCAAACTTCCAAGCGCTAGATGAAATATTGAGCCGTGCATGGATTGATATAAAGTCTTATGGTTATGACGCAAAAGGAAACTACAATTTAAGCACTGGAAATGGTACAGATGACGCTCCAGCATTCCAAAAGGCTTTAGACAGAGCACAAAACAGAACGAGTAGCGTCACTATCTTTGTACCAGATGGAACGTACCGACTAGGTAGTGAGTTGAGAATATACAGCAATACATCCATCATAATGAGCCCTAACGCTACCCTAGTCAGAGATCACTCAAAGTATCTCTTGTTCAACGGAGTAAGAGCCGCAGACGGTGGGTCTCCTATCAGTGGGTACAACGGAGATGGCAACATTCTTATCCAAGGTGGAACCCTGACAGGTCAAGGCAACAAGCAGACAGACAAAGCTAGTATTGTCCATTTTGGTCATGCTCAAAATATTACCTTTGATAACGTAACCCTTAAGGATTGTTCTAACTCGCATCATATCGAGTTTAACGCTTGCAAAGATGTATACGTTAAGAATTGTAATTTCCTCGGCTGGTACGGAACAGTTGATACATACAACGAGGCTATCCAGTTAGACTTAGCAACTCCAGAGTTAACAACCGTGGCTGGCGGTGACTATACCCCTTGTAAAAATGTCTATATTGACAATACATACTTTGGGAAGTCAACCACAGCAGGGTCAAAACCAATTGGTCGAGGAATCGGGTCTCACTCAGGGGCTATCAACCGTTGGCACGAAAACGTTCATATCACTAATTGCACATTTGATAGTACTGTAGAGTGGGCTTGTCGTGCTTATGCTTACAAGGATTTCTATTTTACAAACAATCAGATTATAAATTGTGGTCGTGGTGTCAACGTGAGGTCTAATATCTCAACGGATGAAAAAGATACAATAGATGCTAACACAGGTGCTCAAACAGGTAAGTCTCAAAACGTAGCTAGGTATGTTATTGCCAATAACACCTTTGGCGGCAGTATGACTGGTGGTCGAGCTATCGAGATTTACGGTGAAGAAACTGGGCGTATTTATTACCCAATAGTAACAGGCAATACGATCAACGTTACCTCTGTTACAACAGGTGAGATGGTTTACCTCAACTATGTTAGATACGCAACAGTAACAGGCAACAATGTTAGTGGAGATAGCAAAGCTACTTGTATTGGTCTCAATGGAAATACTACAGAGGTTACTATCGGAAACAACATTTGTGCGTTTGGTGATCGTGGTATCGCCGTTTATGGTGCCAATGTGGTCATGCAGAACATCAGCATCTTAGGTAACACAATAAGAGGGATGCAAAGAAGCGGAATCCACCTTGATGGTATTGACGGGTTTTCTTGCGTTGGTAACACCGTATTTGATTGCAACAAGGCTGGCGGAGATGAAAATCATATAAGGGTTGTTGTCGGTAATAAAAATGGTACAGTCAGCGGCAATCTTTGTACAGTAGCTTGCCCCACTAGTATTTATGTTTCAAACACAAATAGTCGTATTAACGTCACAGGGAATGTATTATCTGGTGGTCTGGCAAATAATTCATCGGGCGGAGCTTCTTCAAACAACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
afe0b13298d6cbc5cb3fd992689c0c49864b198770082bb123fe785817042fad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8589
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of Bacillus pumilus Siphophage Glittering Matthew,S.P., Decker,S.L., Chamakura,K.R. and Kuty Everett,G.F. 2013 24309725 GenBank