Protein

View in Explore
Genbank accession
XFA12746.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVMSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNPVTGQTQKTLPAVLRGAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLATGGISDSAWDAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFSGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPFSQYPVHMLPLNHLIDNLLVRGCLGVGFGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAVIDTNTKDFPANQIYISGACRVNGLRLIGIRSTAGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNTRINSFNNDSAALRLRIHKLTKTLDSGSVYSHINGGPGSGSAWTEITAISGSLPDAVSLKINRGDYRAMEIPVAVTVLPDAAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72802,69770 Da
isoelectric point:5,05619
aromaticity:0,08772
hydropathy:-0,15132

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
G3DSA:2.10.10.80
ATT
65–130
G3DSA:2.10.10.80 IPR015331
IPR040775
RBD
71–131
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
XFA12746.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFA12746.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9926
Central domain 155 625 472 0,9748
C-terminal 626 684 58 0,9111
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-625
C-terminal
626-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_ZC10
[NCBI] 		3250149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFA12746.1 [NCBI]
Genbank nucleotide accession
PQ152681.1 [NCBI]
CDS location
range 22965 -> 25019
strand +
CDS
ATGTCCAGCGGTTGCGGTGATGTAATGTCACTTAATGATTTACAGATAGCCAAAAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAACAAGGCGGTGTGGCCGGCGGTGCAGATATCGACTACGCCACTAACCCGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCGGTCTTACGTGGCGCTGGTTTCTCTCCGGCATCTTTTAATTTCACGACCGGGGGTACTCTAGGCGTAAACGACGCAGATAAAGCTGTTCTTTGGCCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTGCGACAGGCGGCATTTCGGATTCCGCTTGGGACGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGCGTTCTTATCGACCGCGATTACACTTTCAGTAATAACGAGACCGTTAACTTCAGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCTGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGATGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGCAAGGGTAACTATGTTATTGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCTCAATTCTTACGAAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACTTCGTATCGTGCGGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCAGCAGTGCTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCCGAAGATGACCGCCCAGGGGATTTCCCCTTTTCTCAGTACCCGGTACATATGCTCCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGAGTTGGCTTCGGCATGGATGGGCAAGGGCTATACGTTTCTAACATAACCGTAGAAGATTGCGCTGGCAGTGGAGCATATCTGTTGACGCATGAAACAGTATTCACAAACATTGCGGTAATAGACACGAATACTAAAGACTTTCCTGCTAATCAGATTTACATTTCAGGGGCTTGCCGTGTTAATGGGCTGCGCTTGATAGGCATCCGGTCTACCGCAGGCCAAGGGTTAACAATAGACGCGCCAAACAGTACAGTTAGCGGAATAACTGGATTCGTGGACCCATCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTGGGAAACACACGTATAAATAGTTTCAATAATGATAGCGCGGCCCTGCGACTCAGAATACATAAGCTAACGAAAACTTTGGATAGTGGGTCAGTGTACTCCCACATTAACGGTGGTCCCGGTTCTGGTTCGGCATGGACTGAAATTACAGCTATTTCTGGGTCGTTGCCGGATGCGGTGTCCCTAAAAATTAACCGTGGCGATTATCGTGCAATGGAAATACCCGTAGCCGTTACCGTGCTACCCGACGCAGCCGTTAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e35b9e5d815b936e5a881c6b19f1f75476e7b252a90e12bac4a1b7e1f0427c17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50