Protein

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Genbank accession
WJZ70094.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSISDTRDAAKYASIAEVAAAQAKTYADKLDSAPDYASQAAASAADAAQSATVAVAAESTVNNYVIAASQYASQAEASAQTAGSAAESAVGRTLRVPESTGINALPASADRQSSVVSFDSSGNAAVKPLADFAILDSNGKIPVENIPAIALTEPFVVSSQAAMLALNAQVGDIAKRTDKGYSFVLAQLPASTLANWVQLNDDILAQLSQSGGAAQIGAVGKASATTNVQALLDQKTYASDLSAVTGSSLVGYQNPSSSVSELVKNSLDKLNVRLIYAADFGVKTDSSDNADALWNLGQFISNATVPLYVIFPKGVSLVGSQQFAGATGQGYSYRPSYFSRAWGDASDMGWFSVHRTNNNITLDMSGWTLKMNSGMRHGSFDPVTGSVYNPSSLPFRNFDYQASQGYLCKIYKAPNTLVLNGTTDFSVSTVVWGGNFGDAGYQAASYNWWINQSSGFVMIGHTAQSSAMDGLYVGESGDSFSPGDTTQIKGSYFKGCVLQDCGRNILSYTGGANAVFEDCEFWRAGNNATGIGGHGSGPASCIDVEAEGGKILNLKFHRCKMMHGGDVSVVGGYAQPYDVTGVVFEDCIMHCQTGTQAFINYARNCLLKNCIVYGGISLDTGTKQDPTKVINCTFYNRVDGTYITNFALSGITNQFENCTVFYEIPSAALPDMVIFNLSGYQPLSGGYGGMAKMKNLRVILSGNSNNITHSDMGGFSYFSDCSIMVEADGVTGSKNLGIYMLDSRPSMDGLAVSGSSLVNFGGAMVNQPGTSIYWDSANRIPAPATISPQIDGAEGLGVRGVEFSRLYSKAGVFTRSPNGTLYQLSVNDSGSLIVTNIP
Physico‐chemical
properties
protein length:838 AA
molecular weight: 88096,21190 Da
isoelectric point:4,92109
aromaticity:0,09427
hydropathy:-0,04809

Domains

Domains [InterPro]
DC_1656
STR
1–191
DC_1656 IPR012334
IPR011050
STR
357–653
IPR011050
DC_1849
RBD
631–838
DC_1849
WJZ70094.1
1 838
Architecture
STR
STR
RBD
STR 1-191 | STR 278-663 | RBD 664-838
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJZ70094.1
1 838
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,9941
Central domain 288 797 511 0,9763
C-terminal 798 838 40 0,9292
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-797
C-terminal
798-838

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage PA-1
[NCBI] 		3056211 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea ananatis
[NCBI] 		553 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ70094.1 [NCBI]
Genbank nucleotide accession
OQ847583.1 [NCBI]
CDS location
range 40723 -> 43239
strand +
CDS
ATGTCTATTTCAGATACCAGAGATGCAGCAAAATACGCCTCCATCGCAGAGGTGGCAGCCGCGCAGGCAAAAACGTATGCAGACAAGCTGGACAGCGCCCCGGACTATGCGTCACAGGCGGCCGCTTCAGCCGCAGATGCGGCTCAGTCTGCTACCGTGGCAGTCGCTGCTGAGTCTACCGTCAATAATTACGTCATCGCAGCAAGTCAGTACGCAAGCCAGGCGGAGGCATCCGCGCAAACGGCAGGCTCAGCGGCGGAATCAGCAGTGGGCAGGACTCTTCGCGTGCCTGAATCGACGGGAATCAACGCGCTTCCTGCATCCGCAGACCGACAGTCATCAGTGGTTTCTTTCGACTCTTCTGGAAATGCCGCAGTTAAACCGCTCGCAGACTTTGCCATCCTCGACTCAAACGGAAAAATACCGGTAGAAAACATTCCTGCCATAGCACTGACAGAGCCATTTGTGGTAAGCAGCCAGGCGGCAATGCTGGCGCTTAATGCGCAGGTAGGTGACATCGCAAAACGAACTGACAAGGGTTATTCGTTTGTTCTGGCTCAACTTCCGGCATCCACACTGGCAAACTGGGTGCAACTCAATGATGACATCCTGGCCCAGCTGTCTCAGTCAGGAGGCGCGGCTCAGATTGGCGCAGTAGGAAAGGCCAGTGCGACAACCAATGTTCAGGCTTTACTGGATCAGAAAACCTACGCATCAGATTTGTCGGCCGTAACAGGGTCGTCGCTCGTTGGTTACCAGAACCCATCCTCATCTGTCAGTGAACTGGTGAAAAATTCCCTGGACAAACTGAACGTGCGCCTGATTTATGCGGCTGACTTCGGTGTAAAAACAGACTCCAGTGATAATGCGGATGCTCTGTGGAATCTGGGCCAGTTCATTTCGAACGCCACCGTACCTTTGTATGTCATCTTTCCAAAAGGAGTCAGCCTTGTTGGCTCTCAGCAGTTCGCAGGAGCAACAGGACAGGGATATTCATACCGTCCATCATACTTTTCACGAGCCTGGGGTGATGCATCAGATATGGGCTGGTTTTCTGTCCATCGCACAAACAATAACATTACCCTGGACATGTCGGGCTGGACTCTGAAAATGAATTCTGGCATGAGGCATGGGAGTTTTGATCCGGTGACGGGGAGTGTCTATAACCCTTCATCGCTGCCGTTCCGTAACTTTGATTACCAGGCCTCTCAGGGGTATTTGTGCAAAATATATAAGGCACCTAACACACTGGTTTTAAACGGAACAACAGATTTCAGCGTCTCTACCGTAGTGTGGGGTGGTAATTTTGGCGATGCAGGTTATCAGGCAGCGTCATATAACTGGTGGATAAACCAGTCTTCTGGATTTGTGATGATTGGTCATACTGCTCAGTCTAGCGCAATGGACGGACTTTATGTTGGTGAAAGCGGTGATTCGTTTTCCCCTGGAGATACAACGCAGATTAAAGGAAGCTACTTCAAAGGTTGTGTTTTACAGGATTGCGGAAGAAACATTTTGAGCTATACCGGTGGAGCAAATGCTGTATTTGAAGATTGTGAGTTCTGGAGGGCAGGAAATAATGCAACGGGGATTGGCGGTCACGGATCTGGCCCAGCGTCATGTATAGATGTAGAAGCCGAGGGCGGCAAGATACTCAACCTGAAGTTTCATCGCTGCAAAATGATGCATGGAGGTGATGTTTCTGTTGTAGGAGGGTATGCACAGCCTTATGACGTAACTGGTGTGGTTTTCGAAGATTGTATTATGCATTGCCAGACTGGAACGCAGGCGTTCATAAACTATGCCAGAAACTGCCTGCTAAAGAACTGTATTGTCTACGGCGGAATATCGCTTGATACAGGGACAAAACAAGATCCGACAAAGGTCATAAATTGCACTTTCTACAATCGCGTAGATGGAACATACATTACTAATTTTGCCCTGTCTGGCATCACCAATCAGTTCGAAAATTGCACGGTTTTTTATGAGATTCCTTCCGCCGCTCTTCCCGATATGGTTATTTTTAACCTTAGTGGTTATCAGCCTCTTTCGGGTGGGTATGGCGGAATGGCTAAGATGAAAAATCTCAGGGTGATTTTGTCTGGCAACAGCAATAACATTACACATTCAGATATGGGAGGGTTTTCTTACTTCAGCGACTGCTCAATCATGGTTGAGGCCGATGGTGTTACCGGGAGTAAGAACCTTGGTATATATATGCTTGACTCTCGTCCTTCAATGGATGGTCTTGCAGTTTCTGGCTCTAGTTTAGTTAACTTTGGCGGTGCAATGGTTAACCAGCCAGGCACTAGTATCTACTGGGATTCAGCCAACAGGATACCAGCGCCTGCAACAATATCCCCTCAGATAGATGGTGCAGAAGGGCTGGGAGTGAGAGGGGTGGAGTTTTCCCGCCTTTACTCGAAAGCCGGTGTTTTCACCAGATCGCCAAATGGCACTCTCTACCAACTTTCTGTAAATGATTCCGGTTCACTCATTGTAACCAACATCCCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcd3f6dafba4c91080544a8a59b747cdbaaf58e7b483e5ad4dea77cc250dddc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50