Protein

View in Explore
Genbank accession
CAH9011765.1 [GenBank]
Protein name
putative methyl-accepting chemotaxis protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MSVQIVGTMLDPSGGQPAGGAMIQFIALAPYAGVAKGAQSIQTTSATGEYDFPLNYGRYAVAINHSGRFVNQAVSVSVNEESPATMDLDTLFESTAPLTPPEFAYLEELLAKAEQAVVDAEGFAGDAANQVSLAEGEVVKATNQANIATIEADRSKTEADRAAEVTGLDTVEQAVDMALGEFAGLMTESEARAINRINEAKYDASGFVDMGKAYTQSSANVGINEGMWTALDNPNLLRMGSDPDLTSSGESKTIFPVLHIAGAVSNILKMSSPSANRIYSQFLLPEAEDGARIYDSTGDARGSGQASLDLKVDVDPKYGDAPSGTEAEILREAVGRAFEGHCKNGDFRLGDNGDWASDASSWGVTTSGAEAVNLTSRSLYIPASVAAGVTYKIAFVCELTSGSLTIRDSSGTVYTAVDGRNDVTITASGSGFWFGTASSVSAILTSVEIAPVTEEVVTHPVDLVGFEYYEEELTGVQEVFECIQSLSTTFGGTDVPTVLSTRKLSYFQQYDGQFPEVTADPDKINDRYRCVVWPNLTDEQKRKVAAYMGEKLFMGVNGNIVNGRLRARTIRGAGNGDWQNVDSANDTSALSYKDGWVDGSVVEPQGIRDSVQYLPTAQNAAMGYAPTARYTSDSQVSDRYLGAFSLRDALYGDARRFGGVAYQGRCFMYVVATAPRANKGIYVEGLNEYSTAKCSDDKFWYESANKPTTLAECFIGQVGGDIASGKSGHPGGIFYDGIEAGGLNGVIDWRLGAVANDSPEEAAKVEAKVENGTYRGLEKLVWTEVGDTAISGSNKILLRADGANVHVSDIDVTVPSSSSGRGSIPVNGAVYKIDGGVVTDISDRLWGTGDVYISQSDLPDTATVVIRYKTNLSVSGDFNTQMVIGDPANILQTKGLKDGWLGTWCNVIPDGTQLWFPYSLKFVGDTSSSSARRTYTVDGGVTWIEGGLTFDSTLNAYRSAADANYVGSHSYRAFANQTKPSENKRVYNGKAGLMSVFSTMANQQSTLSETLIGKVLKSSGVNLPYGATNSLTDFTIIDAGYASNESLWGKLGEIAGQFPNHTKLRLGAPINDSPAIKVLPYQISNNGKGSIGYQANELTWDATKATPDDATAADGSSFTAWVVGETYKITGGQFSGKVLQCVGSLSVVLDGYIFEGKDGLYLGSTGALRFKPYTLTTGWGDDDTIKVTAEGSDTFVDTNGIINESVVHELAIPYTWTSNHARAGTQVPGVDL
Physico‐chemical
properties
protein length:1232 AA
molecular weight: 130951,52880 Da
isoelectric point:4,58437
aromaticity:0,08929
hydropathy:-0,20763

Domains

Domains [InterPro]
G3DSA:2.60.40.1120
STR
5–90
G3DSA:2.60.40.1120
IPR008969
ATT
5–89
IPR008969
DC_1387
STR
20–1188
DC_1387
CAH9011765.1
1 1232
Architecture
ATT
STR
ATT 5-89 | STR 90-1188 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH9011765.1
1 1232
Domain Start End Length (AA) Confidence
N-terminal 1 461 461 0,6471
Central domain 462 1221 761 0,9688
C-terminal 1222 1232 10 0,2203
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-461
Central
462-1221
C-terminal
1222-1232

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 168E36-1
[NCBI] 		2963172 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH9011765.1 [NCBI]
Genbank nucleotide accession
OX241434 [NCBI]
CDS location
range 15898 -> 19596
strand +
CDS
ATGAGTGTTCAAATTGTAGGAACAATGCTAGATCCTTCAGGTGGTCAGCCTGCTGGTGGTGCGATGATTCAGTTCATTGCCCTAGCGCCTTACGCTGGAGTCGCAAAAGGGGCTCAGTCAATCCAAACAACATCGGCAACAGGTGAGTATGACTTTCCTCTAAATTATGGCCGTTACGCAGTGGCAATTAACCACTCTGGCAGATTTGTTAATCAAGCAGTATCAGTGTCGGTGAATGAAGAATCACCAGCAACCATGGATCTTGATACTCTGTTTGAGTCTACGGCTCCACTAACCCCGCCAGAGTTTGCGTACTTAGAAGAGTTGCTAGCAAAGGCTGAACAGGCAGTTGTTGATGCGGAAGGCTTTGCTGGTGATGCTGCCAATCAGGTTAGCCTAGCTGAGGGTGAGGTTGTAAAGGCTACCAATCAAGCTAACATCGCCACCATCGAGGCTGACCGTTCCAAGACCGAGGCCGATCGTGCAGCTGAGGTGACTGGTCTAGATACTGTCGAGCAGGCTGTTGATATGGCTCTTGGTGAGTTTGCAGGCCTAATGACTGAGTCAGAGGCTCGTGCAATCAACCGCATTAACGAAGCCAAGTATGATGCTAGTGGCTTTGTTGATATGGGCAAGGCATACACACAAAGCAGCGCTAATGTCGGAATTAACGAGGGGATGTGGACGGCACTAGACAATCCAAACCTACTTCGAATGGGCTCTGACCCTGATCTAACATCATCTGGAGAGTCGAAGACTATTTTTCCTGTTCTTCATATAGCAGGGGCTGTTTCGAACATTCTTAAAATGAGCTCACCTAGCGCTAATAGAATTTACAGTCAATTCTTACTGCCAGAAGCCGAAGACGGTGCTCGTATTTATGATTCAACTGGTGACGCTCGAGGTTCAGGCCAAGCAAGCCTAGACCTAAAGGTAGATGTTGACCCTAAGTATGGTGATGCTCCTTCAGGTACAGAAGCTGAGATTCTTAGAGAGGCTGTAGGTCGTGCGTTTGAGGGGCATTGTAAGAATGGTGATTTTCGTTTAGGTGATAATGGGGACTGGGCTAGTGATGCATCATCTTGGGGTGTGACGACTAGCGGAGCGGAAGCTGTAAACTTAACATCTAGAAGTTTGTACATCCCCGCGTCAGTTGCCGCAGGAGTTACTTATAAAATTGCTTTTGTTTGTGAGTTAACATCAGGCTCTTTAACTATTCGTGACAGTAGTGGGACTGTATACACTGCGGTAGACGGTCGCAATGATGTAACTATTACTGCATCAGGAAGTGGATTTTGGTTTGGAACTGCGAGCTCCGTCAGTGCGATATTGACCAGCGTAGAGATAGCACCAGTCACAGAAGAAGTAGTAACACACCCTGTTGACCTCGTAGGTTTTGAATACTACGAAGAAGAACTAACAGGCGTGCAAGAGGTATTTGAATGTATTCAATCGCTTTCTACTACGTTTGGTGGTACCGACGTACCAACCGTTCTATCAACTCGCAAGCTTTCTTACTTCCAGCAATATGACGGGCAATTTCCAGAAGTAACGGCAGACCCCGATAAAATCAATGACCGATACCGCTGCGTAGTTTGGCCAAACCTAACCGACGAGCAAAAGCGCAAAGTTGCTGCCTACATGGGTGAAAAGCTGTTTATGGGTGTTAACGGTAATATTGTTAATGGCCGTTTACGTGCGCGCACCATTCGTGGTGCAGGCAATGGTGATTGGCAGAATGTAGATAGTGCAAACGACACATCCGCACTTAGCTATAAAGATGGTTGGGTGGATGGTTCGGTGGTGGAGCCTCAAGGTATTCGTGATTCCGTACAATACTTGCCGACAGCTCAGAACGCTGCAATGGGTTACGCCCCAACGGCTAGGTACACAAGTGACAGTCAAGTATCAGATCGATACTTGGGGGCTTTTAGCTTACGTGACGCTCTATATGGTGACGCTCGTAGATTTGGGGGTGTTGCATACCAAGGCCGTTGCTTTATGTATGTAGTAGCTACCGCACCTAGAGCGAATAAAGGAATTTACGTAGAAGGTCTGAATGAGTACAGCACAGCAAAATGTAGCGATGATAAATTCTGGTATGAGTCAGCAAACAAACCAACAACATTGGCTGAATGTTTTATTGGTCAGGTTGGCGGTGATATTGCTAGCGGTAAGTCAGGCCACCCAGGTGGTATTTTCTACGATGGTATCGAAGCAGGCGGTTTGAATGGCGTTATTGATTGGCGTCTAGGTGCTGTAGCTAATGATTCACCAGAAGAAGCCGCTAAGGTAGAAGCTAAGGTGGAGAATGGTACTTACCGCGGTTTGGAGAAGTTGGTTTGGACTGAGGTAGGTGACACTGCAATTTCTGGTAGTAACAAAATTCTTCTTAGAGCTGACGGGGCAAACGTACATGTAAGTGACATTGATGTTACTGTACCTTCATCATCAAGTGGTAGAGGTTCAATCCCTGTTAATGGTGCTGTATATAAAATAGACGGAGGCGTTGTTACAGATATCTCAGATAGACTTTGGGGTACCGGTGATGTCTATATTAGTCAATCTGATTTGCCAGATACGGCAACTGTAGTAATTAGGTACAAAACCAACCTATCAGTATCTGGTGATTTCAATACCCAAATGGTTATTGGTGACCCTGCTAACATTCTGCAAACTAAGGGGCTTAAAGATGGCTGGTTGGGTACTTGGTGTAATGTTATTCCTGATGGCACTCAGTTGTGGTTCCCTTACAGCCTTAAGTTTGTGGGGGACACATCAAGCTCATCAGCAAGACGCACTTATACAGTGGATGGCGGAGTGACGTGGATCGAGGGAGGGTTAACGTTTGATAGCACCCTGAATGCCTACCGAAGTGCTGCTGATGCAAACTACGTAGGATCACATAGTTACAGAGCATTCGCCAATCAAACCAAGCCAAGCGAGAATAAGCGCGTTTACAATGGTAAGGCTGGGTTGATGAGTGTGTTTAGTACAATGGCGAACCAGCAAAGTACATTGTCTGAAACTCTAATAGGTAAAGTTCTAAAATCTAGCGGGGTTAACCTACCTTACGGAGCCACTAACTCACTAACAGACTTCACCATCATTGATGCTGGGTATGCTAGTAACGAAAGCCTTTGGGGTAAGCTTGGGGAGATTGCAGGCCAATTCCCTAACCATACGAAACTTAGACTGGGGGCTCCGATCAACGATAGCCCTGCGATTAAAGTCCTACCGTACCAAATCAGCAATAACGGTAAGGGTAGTATTGGGTATCAGGCCAATGAGTTGACTTGGGATGCTACAAAGGCAACACCAGATGACGCAACAGCGGCAGATGGAAGCAGTTTTACTGCTTGGGTCGTTGGTGAAACATATAAGATTACAGGCGGTCAATTCAGTGGCAAGGTTCTTCAATGCGTGGGGTCTTTGAGTGTTGTACTCGATGGTTACATCTTTGAGGGCAAAGACGGCCTATATCTAGGGTCAACAGGTGCATTGCGCTTTAAGCCTTACACCTTAACTACCGGTTGGGGCGACGACGATACAATCAAGGTGACTGCGGAAGGTAGTGACACTTTTGTGGACACAAACGGCATTATCAACGAATCAGTGGTTCATGAACTTGCCATCCCGTACACTTGGACTTCTAACCATGCTCGTGCTGGCACACAAGTACCGGGCGTAGATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
51401afe12cb19900222a9024d41d141dd5539e839160775637a4555c138f2c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50