Protein

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Genbank accession
QHB42273.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSQFSQPKGSVSKETNKDSIARKFGCKKSEVLYAKAGVSLSGYKVIYDKNTERSYALPSDLPSDSVFISLTNAILTHNGGTVDLGALAVLRGEFVTVGGTFTVGGTLGVKNELLTHDDGKYRWGGTFPKIVPLGSSPEASGGISPTTWIKIYDPSLREILFSSAGAGVIGSADGNVQNDLSTLKISTTKLNNHADLVIDDYLFSGETTYDNAIQRVLTESLSSGRPIKFLPHVYNFSSPVTLNMDAPGIKIYGAGVSRTELRFPNAAAGVTQLIIKSTADWYDFVWEGMSVRSSHAGILCQIGNTNFVDPLNVARLEDLAFLNSSSIGDNNVVALSLEYGVQCSLINVRANCYATGTGVNVGRALVVRQVGFTTYVSCSFGNASYGVSFLDGVSFTNNFIGCDFENINIALYNGVPTSGGHTFIGCQFSLWTQFLAQAPVGSTNRFLIINPNVSQVDGLVDPNNAVGVKFQNDQLDITTPGLPASGSSVTNTTGRVVVVTIGGGTVSAILRNGGTLGITNGTVILLPMDTITLVYSAGPSWSWYKLG
Physico‐chemical
properties
protein length:548 AA
molecular weight: 58090,83470 Da
isoelectric point:5,90969
aromaticity:0,09124
hydropathy:0,08339

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 IPR040775
DC_0071
STR
1–544
DC_0071
G3DSA:2.10.10.80
ATT
94–163
G3DSA:2.10.10.80
QHB42273.1
1 548
Architecture
ATT
STR
ATT 1-163 | STR 164-544 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHB42273.1
1 548
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,9949
Central domain 212 466 256 0,9728
C-terminal 467 548 81 0,9786
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-466
C-terminal
467-548

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage Ds20CZ
[NCBI] 		2686432 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae > Limestonevirus
Host Dickeya solani
[NCBI] 		1089444 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
0c124f7ff222fa98aecc7a60d2a5dd3d7883dd07260afe6dd17d0b7fbca49027
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50