Protein

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Genbank accession
XCP73886.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
Protein sequence
MTMYVLVRSRYRASRRGGRWQEADFTNEPVTTLAAKYGDVYLYIEYPGQGQPVTKALHWVNVTNWLNGVGPAVTVQQWLTSLGNTALPFDKELPNEKIRLVKYAQAWHCGYNFTPVARGGHPLDQGSDFHKEDLLMTHPKHQPAKIRDYSMISVNGYFHLCDYTTAGVRIIDGNTTLRKCNDNQIGVYSFETIGKLQFVPIVDNMISGLNPTAPLWDGAYLTMPANIDIKNKTVLLVTGGYLNVLSSVYNRVGERTWRVQFGNMMFLDRYLESYHAMDLSSLGLTIDPENPTLFNVDELKDNEVIRKYLTLSQSFFVIVDSISFFQEYEAIEYLNLPGRYFDNKYDRAPLVGAYGRMLDYHTIKEPHKEGIYPQHENMYVYCAVLNRRNAYDANTRAWPKQQSVDGGRYPAHPYRDETAYYRILGVEG
Physico‐chemical
properties
protein length:428 AA
molecular weight: 49109,05760 Da
isoelectric point:6,64081
aromaticity:0,12850
hydropathy:-0,40678

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCP73886.1
1 428
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,0014
Central domain 155 381 228 0,6845
C-terminal 382 428 46 0,6410
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-381
C-terminal
382-428

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73886.1 [NCBI]
Genbank nucleotide accession
PP968062 [NCBI]
CDS location
range 172241 -> 173527
strand +
CDS
ATGACAATGTACGTGCTTGTACGTTCTAGGTATCGCGCTAGTCGCCGAGGTGGTCGGTGGCAGGAAGCGGACTTTACAAATGAGCCAGTTACAACACTGGCTGCAAAATATGGGGATGTCTATCTCTACATCGAATATCCAGGCCAAGGCCAACCTGTAACTAAAGCACTGCATTGGGTTAATGTTACTAACTGGTTGAATGGTGTTGGACCGGCAGTTACTGTTCAACAGTGGCTGACTTCTTTAGGGAATACCGCTCTTCCTTTTGATAAGGAACTCCCTAATGAGAAAATTCGTTTGGTGAAGTATGCCCAGGCATGGCACTGTGGCTATAATTTTACCCCGGTTGCTCGTGGTGGACACCCTCTTGACCAAGGGAGTGACTTCCATAAGGAAGATCTCCTTATGACTCACCCGAAGCACCAACCGGCAAAGATCCGAGACTACTCGATGATCTCTGTCAACGGTTACTTCCATCTCTGTGACTATACCACTGCTGGTGTTCGTATTATCGATGGCAATACAACGCTTCGTAAATGTAACGATAACCAGATTGGTGTATATAGCTTCGAGACTATCGGTAAGCTTCAGTTCGTACCTATCGTCGACAACATGATCAGTGGACTCAATCCTACTGCTCCTCTGTGGGACGGTGCTTATCTTACTATGCCTGCCAATATCGACATCAAGAACAAAACTGTACTACTGGTTACTGGTGGTTATCTGAACGTTCTGTCGAGTGTGTATAACCGTGTTGGTGAAAGGACCTGGCGAGTACAGTTCGGGAACATGATGTTCTTGGATCGTTATTTGGAATCCTATCACGCTATGGATTTGTCTTCCCTTGGGTTGACTATTGATCCAGAGAACCCGACTCTATTCAATGTCGATGAACTTAAAGATAACGAAGTCATTCGCAAGTACCTGACCTTGAGTCAGAGCTTCTTTGTGATCGTTGATTCTATTTCGTTCTTCCAAGAGTACGAAGCAATTGAGTATCTCAATCTACCTGGCCGTTATTTTGATAACAAATACGATCGTGCTCCTCTGGTTGGCGCGTACGGTAGAATGCTAGATTATCACACCATCAAAGAACCTCATAAGGAGGGTATCTATCCTCAACATGAGAATATGTACGTTTACTGTGCTGTGTTGAACCGTCGGAATGCTTACGATGCAAATACACGCGCATGGCCTAAACAACAGTCTGTAGATGGTGGTCGTTATCCAGCTCATCCGTATCGCGATGAGACGGCATATTACCGTATTCTCGGTGTTGAAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7adc82b33ff89d5e4470d9b55a09c2af4382e000e0bf3f6281627e3fe61c5d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2722
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank