Protein

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Genbank accession
URG13938.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVTGSFESVYRGVSQQVPQARRSGQMAEQVNMISDPVRGVVRRHGSQALHGFQISGSDMTATKLAELARKYTTAPFHCNGKEYELFYAKEGVTGYPGAVPVVAYDKAAKQILPTVLYGGLANLLTSKGVSSLVNIGKFCLIAVNGFSPTYNFATNMVDTPAPRDGVLWVRNGGFSRTYTLRLTMVSGQQVAVSYTTPAATYQGTLDTSDIPYDEAKPWLYQQEVANRTNAYNTAVTKHIAEATAAIAPDAIAKQLKLKLEAYISAGNVANEGAYVYWNTLANVAFASLDDGGDDSYARVNVHSVDTVEKLVPQAYNGMLMKVAAKRSNNKDAFYMRATTKDGSMFGEVVWKESAAQVIQPLQVFCVAYVHDGKLYIGGTPAELNAATGGAANCPAYKDSVVGDSNSQPLPQLFGRQIDYLGVFQDRLIIGTGSTLLCSRPGDYFNWFRQTVLDVLDNDPIEMYALGSEDDTIKWDTSFDRNHVLFGRKFQYVLPGRVTLTPKNPSIQIMSANEDAVRAQPKSSGNFVFFAKDASVRGSVHQIQLGVSADTAEAYECSQQLDRYLKGYPIQLLCTTSPYNVFVRTYDMPNGFYVYSYLDAMGGGERLYDSWGRWEWNPMLGACMGIAQYQGDILCLTVRSRPGKGSWMFMDLFSLDTRISDYPYLDSWRGYKDVAASPLWADQAAHNEASVSYLKSHSYYMLGTKWEDVDANMPWYDEAGHREFLTFGWEFESSLELTNPYLRDRNDKAITNGRLTLLNYSITLHDSGGLTACREDADRKLCTTTFDGRLLTRKQNIIGAAPILDTTVRVPVGKEVRECKVTLSAMTWLPFGIASIEWTGHWFNNARRV
Physico‐chemical
properties
protein length:850 AA
molecular weight: 94201,29810 Da
isoelectric point:6,27266
aromaticity:0,11294
hydropathy:-0,25412

Domains

Domains [InterPro]
IPR058003
TTP
1–849
IPR058003
DC_0058
STR
1–850
DC_0058
URG13938.1
1 850
Architecture
STR
STR 1-850
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13938.1
1 850
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,7317
Central domain 159 357 200 0,4417
C-terminal 358 850 492 0,4456
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-357
C-terminal
358-850

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AHPMCC7
[NCBI] 		2945923 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13938.1 [NCBI]
Genbank nucleotide accession
ON365567 [NCBI]
CDS location
range 12702 -> 15254
strand +
CDS
ATGGCCAAAGTAACAGGCTCCTTTGAATCGGTTTATCGCGGCGTCTCCCAGCAGGTTCCGCAAGCCCGCCGCTCAGGTCAGATGGCCGAACAGGTCAACATGATTTCAGACCCGGTGCGGGGAGTGGTTCGCAGGCACGGTAGCCAAGCCCTGCATGGCTTCCAGATTTCGGGCTCTGACATGACAGCCACCAAGCTGGCCGAGCTGGCCCGCAAGTACACCACGGCACCCTTCCACTGCAATGGTAAAGAATACGAGCTGTTCTATGCCAAGGAAGGCGTAACTGGCTACCCCGGCGCTGTTCCTGTGGTGGCTTATGATAAGGCAGCCAAGCAAATCCTCCCTACCGTGCTGTACGGTGGGTTGGCTAACTTGCTTACCTCCAAGGGCGTCTCCAGCCTCGTGAACATCGGAAAATTCTGCCTCATCGCGGTCAACGGCTTCTCACCTACATACAACTTCGCCACCAACATGGTAGACACCCCCGCCCCTCGCGACGGTGTGCTGTGGGTTCGGAACGGTGGTTTCTCCCGGACGTACACGCTACGGCTGACCATGGTGAGTGGGCAGCAGGTGGCGGTGAGCTATACTACCCCGGCAGCTACCTATCAGGGCACGCTCGATACCTCCGATATACCGTACGACGAGGCTAAGCCTTGGCTGTATCAGCAGGAGGTGGCCAACCGCACCAACGCCTACAACACGGCAGTGACCAAGCACATAGCAGAGGCCACAGCAGCCATCGCCCCGGACGCCATCGCTAAGCAGCTCAAGCTGAAGCTGGAAGCCTATATCAGCGCTGGCAACGTGGCCAATGAGGGTGCCTACGTGTACTGGAATACGCTTGCCAACGTTGCCTTTGCCTCACTGGATGATGGCGGTGACGACTCGTATGCCCGCGTTAACGTGCACTCGGTAGATACCGTTGAGAAGCTGGTTCCGCAGGCGTACAACGGGATGCTGATGAAGGTTGCAGCCAAGCGCTCCAATAACAAGGACGCCTTCTACATGCGGGCCACCACCAAGGATGGGAGCATGTTTGGGGAGGTGGTATGGAAGGAGTCCGCAGCACAGGTCATCCAGCCGCTTCAGGTGTTCTGCGTGGCCTACGTCCACGATGGTAAGCTCTACATCGGTGGCACTCCAGCGGAGCTTAACGCGGCCACTGGCGGAGCAGCTAACTGTCCGGCGTATAAGGACAGCGTGGTCGGTGACTCGAATTCACAGCCACTGCCACAGCTGTTCGGCCGGCAGATTGACTATCTAGGCGTGTTCCAAGACCGACTCATCATCGGCACAGGCTCTACGCTCCTGTGCTCCCGGCCCGGAGATTACTTCAACTGGTTCCGGCAGACAGTGCTGGACGTTCTGGACAACGACCCGATTGAAATGTACGCCCTTGGCAGCGAGGACGATACCATCAAGTGGGACACCTCGTTCGACCGCAACCACGTCCTGTTCGGCCGTAAGTTCCAATACGTGCTTCCGGGGCGGGTTACACTAACCCCGAAGAACCCCTCCATACAGATTATGTCTGCTAACGAGGATGCGGTTAGGGCCCAGCCTAAATCATCGGGTAACTTCGTGTTCTTCGCCAAGGATGCCAGCGTCCGGGGGTCTGTACACCAGATACAGTTGGGTGTGTCGGCTGATACAGCGGAGGCGTATGAATGCAGCCAGCAGCTGGACCGCTACCTCAAGGGATACCCGATTCAACTACTGTGTACAACGTCACCCTACAATGTGTTCGTGCGGACCTACGACATGCCTAACGGCTTCTACGTATACTCCTACCTAGACGCCATGGGCGGCGGTGAGCGGCTGTACGACAGCTGGGGCCGATGGGAATGGAACCCAATGCTCGGTGCCTGCATGGGAATTGCGCAGTATCAGGGCGACATCCTGTGCCTCACAGTGCGTTCCCGGCCCGGTAAGGGTAGCTGGATGTTCATGGACCTGTTCAGTCTTGACACGCGAATCTCGGACTACCCATATCTTGACAGCTGGCGTGGGTATAAGGACGTGGCAGCATCGCCGCTCTGGGCAGACCAAGCCGCCCACAACGAGGCGAGTGTATCCTACCTGAAGTCGCACAGCTACTACATGCTCGGTACAAAGTGGGAAGATGTAGATGCGAATATGCCGTGGTACGACGAGGCCGGGCATCGGGAGTTCCTGACCTTCGGGTGGGAATTCGAGTCCTCGCTGGAGCTGACAAACCCATACCTGCGGGACAGGAACGACAAGGCCATCACCAACGGCCGGCTTACCCTGCTGAACTACAGCATCACCCTGCATGATTCTGGTGGCCTGACGGCCTGCCGGGAGGATGCAGACCGCAAGCTCTGCACCACCACCTTTGATGGCCGCCTCCTGACCCGGAAGCAGAACATCATCGGTGCTGCCCCAATCCTCGACACCACGGTGCGAGTGCCAGTAGGCAAGGAGGTGCGGGAGTGCAAAGTTACCCTCTCGGCGATGACTTGGCTGCCCTTCGGGATTGCCAGCATCGAGTGGACCGGGCATTGGTTTAACAACGCACGGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc7ad45700dc2684e34f089efa1ece25383dcf5af0b734b5340fd210b04ad740
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila-infecting bacteriophage AHPMCC7 Ghosh,S. and Ghosh,K. 2023-11 — GenBank