Protein

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Genbank accession
XCN26704.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLLVQPSFSAGEMAPATYGRVDLARYYTGLRTCRNFQVLPEGGVQNRSGTKFIAEVKASANFTRLIPFQYSTEQTYILEFGNLYIRFVSNGGQVVSGSVPYEIASPYTTADLRDLKFTQSADVLTIVHPNYAPRELKRLAPTNWTLSAIAFQPGIAAPTGLSGSPRSGGSGDTTNYRYRVTAVSSKDTGSIESWASNTATVASFDDKPGATLSWTAVTGADHYNIYKDKSSGVFGYIGQADTTSFSDINIAPDNDKTVPIGYNPFTGGNNPSVVGYFQQRLVFAASKDQPQTIWMSRVGDFHNFGYSDPYKDDDGIEFTIASREVNQIRHLVSLRDLLVLTSGAEWSVSSSKETGITPESISVSAQSYFGSSGVIPAVYANTALYIQARGGKLSTLAYNDIDAGFRPSDVSVLSSHLLRGYTIEDQAFTLTPNGVLWMVRNDGVLLGFTFMPEQQVFAWHRHDTDGEVESVATVPEGDEDILYMIVKRTINGSTKRYIERMQSRQLNKFESGDYVYDRSFFVDCGLTYDGRGTMSATLTGGTDWKYPNALTLEALSAPFNPGHVGRYLILYGGGDENNIGDVLTVKILAYDSPGVVSVEPQTIVPESLRGISATRWGFAATTISGLGHLEGKTVSILADGNVAPQAVVSGGSITLDGPSLVVHIGLPITAEIETLDITMQNQQAFLGNKKRINQLVVLLEQSRGFWAGARSDRLRAASGWEYKQRATENYGEPIELKTGKAEISISTDWTDDGRIFIRQSDPLPITILGVLPNVQAGG
Physico‐chemical
properties
protein length:779 AA
molecular weight: 84670,69880 Da
isoelectric point:5,23984
aromaticity:0,10013
hydropathy:-0,19936

Domains

Domains [InterPro]
DC_0058
STR
1–774
DC_0058
IPR013783
STR
196–261
IPR013783
XCN26704.1
1 779
Architecture
STR
STR 1-774 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCN26704.1
1 779
Domain Start End Length (AA) Confidence
N-terminal 1 524 524 0,9429
Central domain 525 723 200 0,4322
C-terminal 724 779 55 0,0590
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-524
Central
525-723
C-terminal
724-779

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_FBPa42
[NCBI] 		3231240 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCN26704.1 [NCBI]
Genbank nucleotide accession
PP813864 [NCBI]
CDS location
range 34723 -> 37062
strand +
CDS
ATGACCCTGCTCGTTCAGCCGTCTTTCAGCGCGGGCGAGATGGCGCCTGCGACCTATGGCCGTGTTGACCTGGCGCGCTACTACACCGGTCTGCGCACCTGCCGAAACTTCCAGGTGCTCCCCGAGGGTGGCGTACAGAACCGGTCGGGCACGAAGTTCATCGCTGAGGTAAAGGCCAGTGCGAACTTCACTCGCCTTATCCCCTTCCAGTACTCGACCGAACAGACCTACATCTTGGAGTTCGGCAACCTGTATATCCGCTTTGTGAGCAATGGCGGGCAGGTTGTTAGCGGATCGGTGCCCTACGAGATTGCTAGTCCGTATACGACTGCCGATCTGCGCGATCTGAAGTTCACTCAGTCTGCCGACGTCCTGACGATCGTTCACCCGAACTACGCGCCACGCGAGTTGAAGCGCCTTGCGCCGACCAACTGGACGCTGAGCGCTATCGCGTTCCAGCCGGGTATTGCTGCGCCAACTGGACTATCTGGATCGCCGCGCTCTGGTGGGTCTGGCGACACAACGAACTATCGATATCGGGTTACGGCAGTCAGTTCGAAGGACACCGGTTCTATCGAATCTTGGGCGAGCAATACCGCCACTGTCGCCAGCTTTGACGATAAGCCTGGTGCCACCCTATCCTGGACAGCCGTAACAGGTGCGGACCACTACAACATCTACAAGGACAAGTCATCGGGGGTTTTCGGCTACATCGGCCAGGCTGACACCACTTCGTTCAGCGACATCAACATCGCGCCTGACAACGACAAGACTGTGCCGATTGGATACAACCCATTCACTGGTGGCAACAACCCATCGGTCGTAGGATACTTCCAGCAGCGGCTAGTCTTCGCAGCCAGCAAGGACCAGCCTCAAACCATCTGGATGAGCAGGGTCGGGGACTTCCATAACTTCGGATACTCGGACCCCTACAAGGACGATGACGGCATCGAGTTCACGATTGCCAGCCGCGAGGTCAACCAGATTCGCCACCTCGTATCGCTTCGCGATCTTCTGGTGCTGACCTCTGGTGCGGAGTGGTCGGTCAGTTCGTCGAAAGAAACCGGCATCACTCCTGAGTCGATCTCTGTCAGCGCCCAGAGCTATTTCGGGTCGAGCGGTGTTATCCCGGCGGTCTATGCCAATACTGCGCTGTACATCCAGGCCCGGGGCGGCAAGCTGTCCACGCTCGCCTACAACGACATCGATGCAGGCTTCAGGCCCAGCGATGTGAGCGTGCTTTCGTCTCACCTTCTGCGTGGGTACACCATCGAAGATCAAGCGTTCACGCTGACGCCCAATGGCGTCCTGTGGATGGTCCGTAACGATGGCGTGTTGCTCGGATTCACGTTCATGCCTGAACAGCAGGTTTTCGCCTGGCATCGCCACGATACCGACGGCGAGGTCGAGTCCGTAGCGACTGTCCCTGAAGGCGACGAGGACATCCTGTACATGATCGTCAAGCGTACGATCAATGGGTCTACCAAGCGTTACATCGAGCGCATGCAGTCACGGCAGTTGAACAAGTTCGAAAGCGGTGATTACGTTTATGACCGCTCGTTCTTCGTCGACTGCGGCCTGACCTACGACGGGCGCGGCACCATGAGCGCTACGCTGACCGGTGGGACTGACTGGAAATACCCGAACGCGCTGACCCTTGAAGCGCTATCGGCTCCGTTCAATCCCGGCCATGTTGGACGCTACCTGATCCTCTACGGCGGTGGAGACGAGAACAACATTGGCGATGTGCTGACCGTCAAGATTCTCGCCTATGACTCCCCAGGTGTCGTTTCCGTGGAGCCTCAGACGATTGTCCCTGAGTCATTGCGTGGGATCTCGGCGACGCGCTGGGGCTTTGCCGCAACCACCATCAGCGGCCTTGGCCATCTTGAGGGGAAGACGGTTTCGATTCTCGCGGACGGAAACGTCGCGCCTCAGGCCGTTGTCTCTGGCGGCTCCATCACCCTGGATGGTCCATCGCTAGTCGTCCATATCGGCCTCCCTATCACTGCGGAGATCGAGACGCTAGATATCACCATGCAGAACCAGCAGGCGTTCCTCGGCAACAAGAAGCGCATCAACCAGCTTGTCGTGCTGCTTGAGCAGAGTCGCGGCTTTTGGGCCGGCGCTCGGAGTGATCGTCTTAGGGCTGCGAGCGGTTGGGAATACAAGCAGCGTGCGACGGAGAACTACGGCGAGCCTATCGAACTGAAGACCGGCAAGGCTGAGATCAGCATCAGTACAGACTGGACGGACGACGGACGGATCTTCATCCGCCAGAGCGATCCGCTGCCCATCACCATCTTGGGAGTGTTGCCGAATGTCCAGGCCGGGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1df85e0394b40c850b9cf37be52da24b7b77db9686a55e67f66d568fbf699f8a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Defense systems in Pseudomonas aeruginosa van den Berg,D.F. and Costa,R.A. 2024-11-19 — GenBank