Protein

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Genbank accession
YP_009277010.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MKSLIFNGGLTIPYFIALFIDDAKKTATLASYDPSGYAPEGKKVTAWKFGGQYVRSPDDKFSMRLVSTRVFDFKNLSSIIAKKEISDMASLYVTMDASGLVYPAYNKMTYSYDSKEDGAEHLQRRQISAVGQIYVPFADSTFDEISFRITVNKDYGFWCNKDMLEIMPAAQSFNDLSAKLFPSIATDVDKVEVGPDEKFRVTFQVTPPRKGVWLYLDSEAGYIAKREVQTDENGYASTNVIALGLEPGDEFDVEAGFKWFSNVNRVNVKVK
Physico‐chemical
properties
protein length:271 AA
molecular weight: 30447,15280 Da
isoelectric point:5,25939
aromaticity:0,13284
hydropathy:-0,26458

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009277010.1
1 271
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4642
Central domain 11 209 200 0,8277
C-terminal 210 271 61 0,2356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-271

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009277010.1 [NCBI]
Genbank nucleotide accession
NC_030948 [NCBI]
CDS location
range 41728 -> 42543
strand -
CDS
ATGAAAAGTTTGATTTTTAATGGTGGATTGACCATTCCTTACTTCATCGCCCTGTTTATTGACGACGCTAAGAAAACGGCAACACTTGCTTCTTATGATCCTTCTGGGTATGCCCCAGAAGGTAAGAAGGTAACTGCTTGGAAATTCGGTGGGCAATATGTCCGTTCTCCGGATGACAAGTTTTCAATGCGTTTGGTTTCTACGCGGGTCTTTGATTTCAAGAACCTTTCTAGCATCATTGCAAAGAAAGAGATTAGCGATATGGCATCACTGTATGTGACCATGGATGCATCCGGATTGGTTTACCCGGCATACAACAAGATGACCTATTCCTACGATAGTAAGGAAGACGGTGCAGAGCATTTGCAACGTAGACAGATTAGCGCAGTTGGGCAAATCTATGTCCCGTTTGCGGATTCGACGTTTGATGAAATCTCTTTCAGAATCACGGTGAATAAGGATTATGGTTTCTGGTGTAACAAAGACATGCTAGAAATCATGCCTGCGGCTCAATCGTTCAATGATCTATCTGCAAAGCTTTTCCCATCCATTGCAACGGATGTTGATAAGGTTGAGGTTGGTCCTGATGAGAAATTCCGTGTAACTTTCCAAGTCACTCCACCTAGAAAGGGTGTGTGGCTGTACCTTGATTCAGAGGCTGGATATATCGCAAAACGAGAAGTTCAAACCGATGAAAACGGGTATGCAAGTACGAACGTCATTGCTTTGGGTCTTGAACCCGGTGATGAATTTGATGTTGAGGCTGGTTTCAAATGGTTCTCAAACGTTAATAGGGTAAATGTAAAGGTGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b17f39ab1a41839702787e48cd0305dc02e5038236c9238df44cdf40e5dc0f09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4754
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank