Protein

View in Explore
Genbank accession
ARM67815.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MTIYKNKDIETNINERGVDLGNINVTLYTKDNGTASLRIFLKRETTYENEKVIEPVDLTKTNMTPKLLMIAQDGSIFYESVEIIKPETGVVQYNVSDAVLRHVGKVETSVLLIGEDNTNSHVADFHFYVADSGLSGSIGREVDTELLEDIVADVMAKNAMGVIGEDFKDQLYQEVKDYVKLNVKDFQLHYDDLTYAQRQQLVRELADQTVADVQFKDNSITGAKLVDKTITSTKLADQYSAVKILNEDENITTIYKEGIYFKTTTTKVKGLPSELSDSGYGYSGILIVKPYSMYHYVQTLYDLENKGVFYNRVIKNNTNTEWKSYSDDAILTQNANDKANTKIQNVLNVFEKYSNGNIPDDVIKGASAIQDLRIEGVDPNIPVKIWILARNFSTWNYRIILGQKVNGKWSTLLDTGANFTVTEAENGATNIEYEKNGIKLKARINYNLIPNGDRFLDNRTMDDNPYLVIRPNKIVTVTTGTAGGGEAYDQKLNTTNDVKFNTVNTNSLNTKSLYIDSSFPTGTKTSPPDNLKSGDLWLDTTDSSTHPIVRVMK
Physico‐chemical
properties
protein length:553 AA
molecular weight: 62052,90360 Da
isoelectric point:5,07427
aromaticity:0,08680
hydropathy:-0,44756

Domains

Domains [InterPro]
DC_0885
STR
1–372
DC_0885
IPR018913
ATT
5–154
IPR018913
G3DSA:2.60.40.3350
ATT
9–135
G3DSA:2.60.40.3350
ARM67815.1
1 553
Architecture
ATT
STR
ATT 1-154 | STR 155-372 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1318_01
[NCBI] 		1965486 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus haemolyticus
[NCBI] 		1283 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM67815.1 [NCBI]
Genbank nucleotide accession
KY653116.1 [NCBI]
CDS location
range 38527 -> 40188
strand +
CDS
ATGACGATATATAAAAACAAGGATATTGAAACCAATATCAATGAACGTGGCGTAGATTTAGGAAATATTAACGTTACGCTTTACACAAAAGATAATGGCACAGCTTCATTGAGAATATTCTTAAAAAGAGAAACAACTTACGAAAATGAAAAAGTTATTGAGCCAGTAGATTTAACTAAAACGAATATGACACCTAAACTACTAATGATCGCACAAGACGGTTCAATATTTTATGAAAGTGTAGAAATTATTAAGCCGGAAACGGGTGTTGTTCAATATAATGTGTCTGATGCAGTTTTGCGCCATGTGGGAAAAGTAGAAACGAGCGTATTGCTTATTGGTGAAGATAATACAAATTCTCACGTAGCTGATTTTCATTTCTATGTAGCTGATAGTGGTTTATCCGGCTCAATCGGTAGAGAAGTAGACACTGAATTATTAGAGGATATTGTAGCAGACGTTATGGCTAAAAATGCAATGGGTGTAATTGGCGAAGATTTTAAAGATCAACTTTATCAAGAAGTTAAAGATTATGTAAAGCTAAATGTAAAAGATTTTCAATTGCACTACGATGACCTAACTTATGCGCAACGTCAACAATTAGTTAGAGAATTAGCGGATCAAACAGTCGCAGATGTTCAATTTAAAGATAATTCAATTACTGGCGCTAAGTTAGTAGATAAAACCATTACTAGCACAAAATTAGCTGATCAATACTCAGCAGTTAAAATTTTGAACGAAGATGAAAATATTACAACGATATATAAAGAAGGTATTTATTTCAAAACAACTACTACAAAAGTGAAAGGGTTACCTTCAGAACTTTCAGATAGCGGGTACGGTTATAGCGGTATTTTGATTGTTAAACCATATAGCATGTATCATTACGTGCAAACGTTGTACGACTTAGAAAACAAAGGAGTGTTCTACAATAGAGTTATTAAAAATAATACAAATACAGAATGGAAATCCTATTCTGATGATGCTATTTTGACACAAAATGCAAATGACAAAGCAAACACTAAAATCCAAAACGTTTTAAATGTATTTGAGAAATATTCAAATGGGAACATTCCTGATGATGTGATTAAAGGTGCTAGTGCAATTCAAGATTTACGAATTGAAGGGGTAGACCCTAATATTCCTGTTAAAATTTGGATATTAGCACGTAACTTTAGCACATGGAATTATCGCATAATTTTAGGGCAAAAAGTAAACGGTAAATGGTCAACATTGTTAGATACTGGAGCAAACTTTACCGTTACTGAGGCTGAAAATGGAGCGACTAATATTGAATATGAGAAGAATGGTATTAAGTTAAAAGCACGTATTAACTATAATCTAATTCCGAACGGTGATAGATTTTTAGATAATCGTACTATGGATGATAATCCATATCTTGTTATTAGACCTAATAAAATTGTAACTGTGACAACTGGAACAGCTGGAGGCGGAGAAGCCTACGACCAGAAACTCAATACAACGAATGATGTAAAATTCAATACAGTCAACACCAACAGTTTAAACACAAAATCGTTATATATTGATAGTTCATTCCCTACAGGTACAAAAACAAGTCCGCCAGATAATTTAAAAAGTGGTGATTTATGGTTAGATACAACCGATAGTAGTACACATCCAATTGTGAGAGTGATGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
74ba7645be4dc846a38b5d5d3603b78fb7973f58eec22fbd053d043e037c67db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank