Protein

View in Explore
Genbank accession
YP_009277206.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
Protein sequence
MTTYILNEYYGTLKPKYATAQEWLASTIILKEGEIGVELDTLKSKLGDGIRGWGALPYAFIGAPGPRGKRGTDGIDGYIGLPGTDGKKGDKGDTGDFDPSLFNANPAITQFAPSDSVPMLSNGKVVHSIMPYSFSNFIVGLANTWTGKNKFLNMSKDVTLADTSTSLVMVDISKAKNVIVNDKAGAKTLVFNGKRNDGLMKFDILLINSYPSAYIVWPSSVKWPGGVPPTIINGSSLAITFVTYDRGNTYFGFPQNPTY
Physico‐chemical
properties
protein length:259 AA
molecular weight: 27931,50940 Da
isoelectric point:8,82696
aromaticity:0,11197
hydropathy:-0,14710

Domains

Domains [InterPro]
DC_0999
STR
2–257
DC_0999
SSF69349
STR
16–100
SSF69349
YP_009277206.1
1 259
Architecture
STR
STR 2-257 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009277206.1 [NCBI]
Genbank nucleotide accession
NC_030948 [NCBI]
CDS location
range 165002 -> 165781
strand -
CDS
ATGACAACTTATATTCTAAATGAGTATTACGGTACTCTAAAACCCAAGTACGCTACTGCTCAGGAATGGCTAGCCTCAACGATTATCCTAAAGGAGGGTGAAATTGGGGTTGAATTGGACACTCTAAAATCTAAACTCGGTGATGGTATTCGGGGTTGGGGTGCTCTGCCTTATGCTTTTATTGGTGCTCCGGGGCCGCGTGGAAAACGCGGAACAGATGGGATTGATGGTTATATCGGACTTCCCGGAACGGATGGTAAGAAGGGTGATAAGGGGGACACTGGCGACTTTGATCCTTCTCTGTTCAATGCCAATCCCGCAATTACTCAATTTGCCCCTTCTGATAGCGTACCTATGCTTTCAAATGGTAAGGTAGTGCATAGTATTATGCCTTACTCATTTTCTAACTTCATTGTTGGTCTTGCTAATACTTGGACCGGCAAAAACAAATTTTTGAATATGTCTAAGGATGTGACTCTTGCTGACACGTCCACAAGCCTTGTCATGGTGGATATTTCAAAGGCTAAGAACGTCATCGTAAATGACAAGGCAGGCGCAAAAACTTTGGTTTTCAATGGGAAGAGAAATGATGGTCTGATGAAGTTTGATATCTTGCTTATCAATTCATACCCATCCGCATATATTGTCTGGCCTAGTTCTGTGAAATGGCCCGGTGGTGTACCTCCCACTATCATCAATGGTAGTTCACTTGCCATTACTTTTGTCACATACGATAGAGGGAATACATATTTTGGATTCCCTCAAAACCCAACATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4bd2e3f85ef5033592f20358d8cb850df3b49459b3bb7899db3787df9d2ca908
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7413
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank