Protein

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Genbank accession
UPW42354.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MAELKRKFRAQEGLDAAGEKVINVAKADRTVMSDGVNVEYLIQENTLQQYDSTRGYPEHFAVIYDNRIWVSNREIAAPAGDFTELYWNSVRTDAKWKTVSSGTTNLKSGDFISADTAGRTDMKFILPSNPQDGDTIFIKDIGGQPGYASLTVDASIQSILWMGSQIRTAQMTHPYSQMVFVFSNRLWQLYISDNESRATYITPASIHEAQAGENLVRRFTSGAEVFITLPKHANNGDIISVVDLDSLNPLFHTTLKTYDQNTSIGQVGTHEMQFRTSGDGFVVFDSADNLWRVWDGDLRTRLRIVTEDTDVRPNSHIMVFGANNDEIKTVNLNLPESPAIGDTVKISLNYMRKGQTVNINATGTDTIASNIELLQFPKRSDYPPGATWVQSSTLTFNGDESYVPILDLSYIEDENSQYWVVADNTPTVERVDSTNDETRARLGVIALATQEQANKDKEDNPEKELAITPETLANRIATKIRRGIARLATQAELEVKTGGTLLDDVIVTPKVLNDRTALEDRQGLAELATQSETNDGVDDSRIVTPKKLHNRKASEILTGILALVKTGISTLAGVDRDTKGSNIYDYADNEKAVTPASLFENKATYTSQGGSYLATETEVIQGTPHDPKVPTVVTPVELHKKTATETRIGFSEIATQNEVNTGTDDFRYVTPKKLNGRNATEDLTGISRVATDAEFAAGELDNVISTPKKIKNYFSSPDRKSVVTESGLVESGNSWDHYNLDIQKASETQRGTLQLATQVLTDAGVDDTTAVTPKKLQAKKTSETSEGIIQIATQSETTSGTVGNKAVPPKHLKYAIQEQPDWEASPLRRGPVKLTEGALTFVGDKEFGSGVKFDATTGLYINDNDKLNAGNYFKSGYAISPFEMNKTLQNFLPINATAVNSHKLDNLDSTQFIRRDIDQTVEGSLTLTQQTNTSAPLVSSSTAKFVSMLVTTEATIGDATGHSVINLDAKTNKWVIDGQANSQYLDFTAGTTDVLKLKRDGDVNVVQTLSAGNRVDASKGFSVEGGIMVINPTANNIQIGSQSKATNIQTTDAGNLKVTDTSGSSVILTTKNAVTIVGNNFVNKAGDSMSGRLDISAAMSSVITEAKAIGPLTNETVGNWSAEITTEDIYKTLPGFMVPIYSDDGGGKVIIGYVDYDPADASKRGVRAPGVLSQIGTSKKEFTYQIWNPRPATAYTDAKSSLWIRTYDPVKGAFNEWGRVYTTEAPVTSAEIGAVSTAGSSFNNLTIIDWLQIGNVRITPNPDTQSVDFTWIP
Physico‐chemical
properties
protein length:1273 AA
molecular weight: 138677,71490 Da
isoelectric point:4,99157
aromaticity:0,07148
hydropathy:-0,39497

Domains

Domains [InterPro]
DC_1986
ATT
6–126
DC_1986 DC_1209
IPR048391
ATT
1113–1221
IPR048391
UPW42354.1
1 1273
Architecture
ATT
STR
ATT
STR
ATT 6-126 | STR 342-1112 | ATT 1113-1221 | STR 1222-1260 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW42354.1
1 1273
Domain Start End Length (AA) Confidence
N-terminal 1 842 842 0,9056
Central domain 843 1041 200 0,2416
C-terminal 1042 1273 231 0,6798
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-842
Central
843-1041
C-terminal
1042-1273

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CF-SP2
[NCBI] 		2935508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW42354.1 [NCBI]
Genbank nucleotide accession
OM912978 [NCBI]
CDS location
range 33442 -> 37263
strand +
CDS
ATGGCCGAATTAAAACGTAAGTTCAGAGCTCAAGAAGGTCTGGACGCTGCGGGTGAGAAAGTCATCAACGTTGCCAAGGCGGATCGCACGGTCATGTCCGATGGCGTTAACGTTGAATATCTTATCCAAGAAAACACATTACAACAATATGACAGTACTCGTGGTTATCCAGAGCATTTTGCTGTCATTTATGATAATCGTATTTGGGTGTCTAATAGAGAAATTGCTGCGCCAGCAGGCGATTTTACTGAGCTTTACTGGAATTCTGTGCGCACTGATGCAAAATGGAAAACAGTGTCATCGGGAACCACAAATTTAAAATCAGGTGATTTTATTTCAGCTGACACCGCTGGAAGAACAGATATGAAATTCATTCTTCCTAGCAATCCGCAGGATGGCGATACCATTTTTATTAAAGATATCGGTGGTCAGCCAGGATATGCTTCTCTTACTGTCGATGCATCTATTCAATCCATATTATGGATGGGTTCTCAAATAAGAACCGCTCAAATGACGCATCCATACTCACAAATGGTTTTCGTTTTCAGCAATCGTTTGTGGCAACTTTATATAAGTGACAACGAATCAAGAGCCACTTATATAACTCCAGCTAGTATTCATGAAGCGCAAGCAGGCGAAAATCTAGTTAGAAGATTTACTTCTGGCGCAGAAGTTTTTATTACTCTTCCTAAACATGCTAACAACGGTGATATAATTTCTGTAGTTGATTTAGATTCTCTTAACCCATTGTTTCATACTACATTAAAAACTTATGACCAAAATACTAGTATAGGTCAAGTTGGAACTCACGAGATGCAGTTCCGTACTTCTGGAGATGGATTTGTAGTATTTGATTCAGCCGATAATTTATGGAGAGTATGGGACGGTGATTTACGTACCCGCTTGCGTATTGTAACTGAAGATACTGACGTTAGACCAAATTCTCATATCATGGTTTTTGGGGCTAACAATGATGAAATAAAGACAGTTAATCTAAACTTGCCCGAATCTCCAGCTATTGGAGACACAGTAAAAATTTCTCTTAATTATATGAGAAAAGGGCAAACAGTTAATATAAACGCTACTGGAACTGACACAATAGCTTCAAATATTGAACTTTTGCAATTTCCAAAACGCTCTGATTATCCGCCTGGAGCTACTTGGGTTCAAAGCAGTACTTTAACGTTCAATGGTGATGAATCTTATGTTCCAATTTTAGATTTATCTTACATAGAAGATGAAAACTCTCAATATTGGGTAGTTGCAGATAATACTCCGACCGTTGAAAGAGTCGATTCGACTAATGACGAGACCCGAGCTCGTTTAGGTGTTATTGCTTTGGCAACCCAAGAGCAAGCTAATAAAGATAAAGAAGATAATCCAGAAAAAGAATTAGCGATTACTCCAGAAACTTTGGCGAACCGTATTGCTACTAAAATCCGGCGCGGTATTGCTCGTTTAGCTACTCAAGCTGAATTAGAAGTTAAAACTGGCGGGACTTTATTAGATGATGTGATTGTTACTCCGAAAGTTCTGAATGACCGTACTGCTTTAGAAGACCGTCAAGGCCTCGCTGAATTAGCAACTCAATCAGAAACTAACGATGGTGTTGATGATTCCAGAATTGTAACTCCGAAAAAGTTGCATAACCGTAAAGCTTCAGAAATATTAACCGGTATTTTGGCGTTAGTTAAAACTGGAATTTCAACTCTTGCGGGTGTAGATAGGGATACAAAAGGCAGTAACATATATGACTATGCCGATAATGAAAAAGCTGTAACTCCGGCTTCTTTATTTGAAAACAAAGCTACATATACATCACAAGGTGGTTCATACTTAGCTACAGAAACCGAAGTTATTCAGGGTACTCCACATGACCCTAAAGTACCTACTGTAGTAACTCCGGTCGAATTGCATAAGAAAACTGCTACTGAAACACGTATTGGTTTTAGTGAAATTGCTACGCAAAACGAAGTCAATACTGGGACGGATGATTTCCGTTATGTTACTCCTAAGAAATTAAATGGCCGTAATGCTACGGAAGATTTAACTGGTATTTCGCGAGTCGCGACAGACGCTGAATTTGCTGCAGGTGAATTAGATAATGTTATTTCTACTCCTAAAAAGATTAAGAATTACTTTTCTTCTCCTGACCGTAAATCTGTTGTTACTGAATCTGGATTAGTTGAATCAGGTAACTCCTGGGACCATTATAACCTTGATATTCAAAAAGCATCTGAGACGCAACGCGGCACATTACAATTAGCCACACAAGTTCTCACTGACGCTGGGGTTGATGACACGACTGCTGTAACTCCGAAAAAGTTACAAGCTAAAAAGACATCTGAAACTTCTGAAGGCATTATTCAGATAGCGACTCAGTCAGAAACAACAAGTGGTACTGTAGGAAATAAAGCTGTTCCTCCGAAGCATCTAAAATATGCTATCCAAGAACAACCTGATTGGGAAGCTTCTCCTCTTCGTAGAGGCCCAGTTAAATTAACAGAAGGCGCTTTAACATTTGTTGGTGATAAAGAATTTGGTTCTGGTGTCAAATTCGACGCTACAACCGGTCTTTATATTAATGATAATGACAAATTAAATGCCGGAAATTATTTCAAATCTGGATATGCTATATCTCCTTTTGAAATGAACAAGACTCTTCAAAACTTTTTGCCAATAAACGCAACTGCTGTTAATTCGCATAAGTTAGATAATCTTGATTCAACTCAGTTCATCAGAAGAGATATTGACCAAACGGTTGAAGGTTCGTTAACGTTAACGCAACAAACGAACACTAGTGCTCCTCTAGTATCCTCTAGTACTGCGAAGTTTGTTAGTATGTTGGTTACCACAGAAGCTACTATCGGGGACGCTACGGGTCACTCTGTGATTAATTTGGACGCTAAAACCAATAAATGGGTTATTGATGGACAAGCTAATTCTCAGTATTTAGATTTTACTGCTGGAACTACAGATGTTCTTAAGCTCAAACGAGATGGAGACGTTAACGTAGTCCAAACATTATCGGCTGGTAATAGAGTAGATGCTTCAAAAGGCTTTAGTGTCGAAGGTGGTATAATGGTTATTAATCCTACCGCCAACAATATTCAAATTGGTTCACAATCTAAAGCTACTAATATCCAAACAACAGACGCCGGAAACTTGAAAGTTACTGATACATCAGGCTCTTCGGTGATATTGACCACTAAAAACGCTGTTACTATCGTAGGTAATAACTTCGTTAATAAAGCTGGCGATTCAATGTCTGGCCGTTTAGATATTTCTGCTGCAATGAGTTCAGTAATTACTGAAGCTAAAGCGATAGGTCCTCTTACTAACGAAACTGTGGGTAATTGGTCAGCAGAAATCACAACTGAAGATATCTACAAAACATTGCCTGGATTTATGGTTCCAATTTATTCTGACGATGGCGGTGGTAAAGTAATTATAGGTTATGTAGATTATGACCCGGCTGATGCATCAAAACGCGGTGTAAGAGCTCCGGGTGTATTATCTCAGATTGGAACGAGTAAAAAGGAATTCACATATCAAATATGGAACCCTCGTCCAGCTACAGCTTATACAGATGCTAAATCTTCTCTTTGGATTAGAACCTATGACCCAGTTAAAGGTGCATTCAATGAATGGGGAAGAGTTTACACTACTGAAGCACCAGTTACGTCTGCTGAAATTGGTGCCGTTTCTACAGCTGGTTCTTCATTTAATAACTTAACAATCATAGACTGGTTACAGATTGGTAATGTTCGCATTACGCCTAATCCTGATACCCAATCTGTTGATTTTACTTGGATACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c58725b2ac60189868438ad723c3f5f21e7e6c6b5e2f0297fed54d6473294027
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5595
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50