Protein

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Genbank accession
WOR80498.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQRYSPSIPPQEEEELLPFLNEEFVRVGQTLNDVADGYWGVSMEPPKKLKPGTVKYFAPGVVGPVSGIYYYDLDNQWKLAGTKPKDLPGDFIIFTPANNHQAMGTCAYRMNTAKDEVWITLLASGGNYTDGATVLDLPQAYWPPAELFIPAFSSIIPAQSQITYPPPSDPNAPPLDQVFDVLNRATIQTAVVNQAMFKLTANGRLLIQGIPQGAIFGGTFTYPLVVTP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 25069,26960 Da
isoelectric point:4,64121
aromaticity:0,11354
hydropathy:-0,12795

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSP30
[NCBI] 		3077135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOR80498.1 [NCBI]
Genbank nucleotide accession
OR538763.1 [NCBI]
CDS location
range 33580 -> 34269
strand -
CDS
ATGAGTCAAAGGTACAGCCCCTCGATTCCGCCACAGGAAGAGGAGGAACTGCTGCCCTTCCTTAATGAGGAATTCGTTAGGGTTGGACAGACTCTCAATGATGTGGCTGATGGCTATTGGGGGGTCTCTATGGAGCCCCCTAAGAAGCTTAAGCCAGGAACGGTTAAGTATTTTGCCCCTGGGGTAGTAGGTCCTGTATCAGGTATCTATTATTATGACTTGGATAACCAGTGGAAACTCGCCGGTACTAAACCCAAGGATCTCCCAGGGGATTTTATCATATTCACCCCTGCTAATAATCATCAGGCTATGGGCACCTGTGCCTACCGGATGAATACAGCCAAGGATGAGGTGTGGATCACCCTTCTGGCATCTGGAGGGAACTATACTGATGGTGCTACGGTGTTGGACCTTCCACAAGCCTATTGGCCTCCTGCGGAACTGTTCATCCCAGCATTCTCCAGTATCATTCCAGCCCAAAGCCAGATCACTTATCCACCGCCCTCAGACCCCAATGCACCCCCTCTGGATCAAGTCTTTGATGTTCTTAATCGGGCTACAATCCAAACTGCTGTGGTCAACCAAGCGATGTTTAAGCTTACGGCTAATGGTCGTTTGCTTATCCAAGGAATTCCCCAAGGTGCTATCTTCGGGGGTACGTTTACTTATCCCCTAGTGGTGACTCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c794411f107763ae45f89dc43eccff7c579e489579653b96deeb8e43949d4719
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8037
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploiting Phage-Antibiotic Synergies to Disrupt Pseudomonas aeruginosa PAO1 Biofilms in the context of Orthopedic Infections De Soir,S. and Wagemans,J. 2024-01-11 — GenBank