Protein

View in Explore
Genbank accession
QBX27193.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MDKLKKAIESIGRDIGTLQANQGGALQTTKAYELFPTYATLQAQMTTNIKEKHVDLGLDALIDTKLANGGDPFVTRSKLPTIDTSQLASKNDLEELKRSVGSGSGTGTELKGQGFPYNLNADIGTIYTDTTAKNGAVKWIKKTAGTGSNAWSVLFGDVKFKPRNINSNQTNAYVEFRRVNSTVEVGFGGLSWGWFGIVRRGAPNYVPQGSDRERNVVILNVQGIPVGFRATSSKLGIMTNDKGKRLGTFYLGGPGDGNQLRLQFDDPVPTDRDIGDLRFTNMSYTTDDPWPETI
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32006,56430 Da
isoelectric point:9,07781
aromaticity:0,08503
hydropathy:-0,48333

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan374
[NCBI] 		2548134 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parasanguinis
[NCBI] 		1318 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27193.1 [NCBI]
Genbank nucleotide accession
MK448921.1 [NCBI]
CDS location
range 38734 -> 39618
strand +
CDS
ATGGATAAATTAAAGAAAGCTATAGAATCCATTGGTCGTGATATTGGGACGCTTCAAGCCAACCAAGGCGGAGCGTTACAGACTACCAAAGCTTACGAGTTATTTCCGACTTATGCGACATTACAAGCACAGATGACCACCAACATCAAAGAGAAGCACGTAGACCTTGGACTTGATGCACTGATTGACACCAAACTAGCAAACGGCGGTGACCCGTTTGTCACACGCTCAAAACTTCCAACGATTGACACAAGCCAACTTGCGTCAAAAAACGATTTGGAAGAGTTGAAGCGTTCAGTCGGTTCTGGAAGTGGTACAGGCACGGAATTGAAAGGCCAAGGCTTCCCGTACAATCTTAACGCTGACATCGGTACAATTTATACCGATACCACGGCTAAGAACGGAGCAGTGAAGTGGATCAAGAAAACTGCCGGAACTGGCTCTAACGCTTGGTCGGTATTGTTTGGTGATGTCAAATTTAAACCAAGAAACATCAACTCAAATCAAACTAATGCATACGTGGAGTTCAGACGTGTAAATTCCACGGTAGAGGTCGGCTTCGGTGGTCTATCGTGGGGTTGGTTTGGGATCGTGAGACGAGGTGCGCCCAACTACGTTCCGCAAGGTTCAGACAGAGAGCGAAACGTGGTTATCTTAAACGTTCAAGGAATCCCAGTCGGTTTTCGTGCCACTAGCTCAAAACTTGGTATTATGACAAATGACAAGGGGAAACGTTTGGGAACATTTTATTTAGGCGGGCCGGGTGACGGCAACCAGCTACGCTTACAATTCGATGATCCCGTACCTACTGATAGAGATATCGGAGATTTACGATTTACTAATATGTCGTATACCACAGATGACCCGTGGCCAGAGACTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9437c6ec02835e530857a48b5991db9c2437aaff83770385b04afc50a4dc250
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank