Protein

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Genbank accession
ALO79389.2 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MARCGCGGACQCALTAGDNVTVTGSGSANNPWVINAHADCADVRACLSNGCGITYNATSGAISVDISEDANNALQCRANGLYVGAGAATVTAGCGLTGNGSVGSPIRANTQTWPFACDLEDNGRGVYCGSDGLLYTDPDRLIDFFTDSVNEIVPGANGIAVPTATDTVVRTMQLSVTNPDPCRDAWIQLWQDVDMDIDLPPGGQAMYGIDGDDLWQFENPGDTTMFSVHTQSGKMWSLSVAAGATLNINMDLTAGLGRNNARIRRIQRTMRAWVFSRN
Physico‐chemical
properties
protein length:278 AA
molecular weight: 29216,23760 Da
isoelectric point:4,37225
aromaticity:0,06475
hydropathy:-0,11223

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALO79389.2
1 278
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,0107
Central domain 136 267 133 0,0308
C-terminal 268 278 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-267
C-terminal
268-278

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage phiSAJS1
[NCBI] 		1755682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces avermitilis
[NCBI] 		33903 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO79389.2 [NCBI]
Genbank nucleotide accession
KT989433 [NCBI]
CDS location
range 27601 -> 28437
strand +
CDS
ATGGCAAGGTGTGGGTGTGGCGGAGCCTGCCAGTGCGCCCTGACCGCTGGCGACAACGTCACCGTCACCGGCTCCGGCAGCGCAAACAACCCGTGGGTGATCAACGCCCACGCTGACTGTGCCGACGTCCGGGCGTGCCTGTCCAACGGCTGCGGTATCACGTACAACGCGACGTCCGGCGCCATCAGTGTGGACATCAGCGAAGACGCGAACAACGCGCTTCAGTGCCGCGCCAACGGCCTGTACGTCGGTGCCGGAGCAGCCACCGTGACGGCCGGGTGCGGCCTCACCGGCAACGGCTCCGTGGGCAGCCCCATCCGGGCGAACACGCAGACGTGGCCGTTCGCGTGCGACCTGGAGGACAACGGCCGGGGCGTCTACTGCGGCAGTGACGGCCTGCTGTACACGGACCCGGACCGGCTGATCGACTTCTTCACGGACAGCGTGAATGAGATCGTGCCGGGCGCGAACGGCATCGCCGTGCCGACGGCCACGGACACCGTGGTCCGCACCATGCAGCTGTCCGTCACGAACCCGGACCCCTGCCGTGACGCGTGGATTCAGCTGTGGCAGGACGTGGACATGGACATTGACCTTCCCCCGGGCGGACAGGCCATGTACGGCATTGACGGTGACGACCTGTGGCAGTTCGAAAACCCCGGCGACACCACCATGTTCAGCGTTCACACCCAGTCCGGCAAGATGTGGTCGCTGTCCGTCGCGGCCGGTGCAACGCTCAACATCAACATGGATCTGACCGCAGGTCTGGGCCGCAACAACGCACGGATCCGGCGCATTCAGCGCACCATGCGCGCGTGGGTGTTCAGCCGCAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
24530d83768176e6001f4a35e8554fd1aef5ef752e9ea062c1aba9e67f607d51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence analysis of the Streptomyces avermitilis bacteriophage phiSAJS1 Wang,S. and Qiu,Y. 2010-07 — GenBank