Protein

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Genbank accession
XIF12934.1 [GenBank]
Protein name
tail fiber assembly protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGHYSNTKTIIGGNMADYLSINEFPGNGAIMQIEVQFAGNNPDVGSGAVPYFKPEDVKAQFFTPATDTTPQIVEDKPLGYVGPNTFRTLEPVPTGKILRVYRETEDRFSLVNFVALQNVTERDLDALARQTVFLVEEAKDSSQFAIDTAREAIKYATSSTSVAREALETAGRAEAKANAAVNTSNDASNVAGQALTLATQAKNEAAAAEQHASNVETLASQAQTAAAAAETKATRAETKADQAVGTANAIDGKATQAINTANQATATANSAKSTADAIDGKAQTAINTANAATETANQAKSTAEAIDGKATTALANAETAIGTANQAVITAADAKDLATQANSNVAGKVNRSGDTMTGLLTNTTGFQSSGTGGATTGPFFEMHWPGQSAGMWYLNNSGQVTLAQTGGNGTAAQNYFHINMSDGYLLHRKAGRVMGTLTVDGGLYSNQWNPQSGGTLTANGTLRVQNSVVEVSGVFRTRAPNGANAHFFFENADGSERVLMHADTAHNFNIRTSAGATAVTIRNSDKGMTVTGGINCAALASGGRVQGSDVLSVGYVYAGSGNAYLATNGNVYGPAWGGWLSDWINGNFISLGNFRAKSAEYFSANQIGSYCFLQNVSGVNQGQNGLLDGPNLRLSSHNNVSGTAPEGTWRCLGWCNAGGVSVWIRVY
Physico‐chemical
properties
protein length:667 AA
molecular weight: 69442,55240 Da
isoelectric point:5,49590
aromaticity:0,07346
hydropathy:-0,27511

Domains

Domains [InterPro]
DC_1152
ATT
26–305
DC_1152 DC_1924
Coil
Unmapped
198–239
Coil DC_1834 G3DSA:6.20.70.20
XIF12934.1
1 667
Architecture
ATT
STR
RBD
ATT 26-305 | STR 306-420 | RBD 429-667
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XIF12934.1
1 667
Domain Start End Length (AA) Confidence
N-terminal 1 256 256 0,9866
Central domain 257 455 200 0,4382
C-terminal 456 667 211 0,9003
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-256
Central
257-455
C-terminal
456-667

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PFX2
[NCBI] 		3368642 No lineage information
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XIF12934.1 [NCBI]
Genbank nucleotide accession
PQ397350 [NCBI]
CDS location
range 28208 -> 30211
strand -
CDS
TTGGGCCACTATAGCAACACCAAAACCATCATCGGAGGCAACATGGCAGACTACTTGTCTATCAACGAGTTCCCCGGCAATGGCGCCATCATGCAGATCGAGGTTCAGTTCGCTGGTAACAACCCCGACGTAGGTTCTGGTGCTGTGCCGTATTTCAAACCGGAAGACGTGAAGGCTCAATTCTTCACTCCGGCCACCGACACCACTCCGCAGATCGTGGAGGATAAGCCACTCGGCTATGTCGGCCCTAACACTTTCCGCACGCTGGAGCCTGTGCCTACTGGCAAGATCCTGCGAGTGTACCGTGAAACCGAGGATCGCTTCTCGCTGGTCAACTTCGTTGCCTTGCAGAACGTGACCGAACGTGACCTTGACGCTCTGGCTCGCCAGACAGTCTTCCTCGTCGAAGAAGCCAAGGACTCATCGCAGTTCGCAATCGACACCGCTCGCGAAGCTATCAAGTATGCAACGTCGTCTACCTCGGTAGCGCGGGAAGCTCTTGAGACAGCCGGTCGAGCAGAGGCCAAGGCGAACGCTGCGGTCAATACGTCGAACGACGCTTCGAACGTAGCAGGCCAAGCACTCACTCTCGCCACTCAGGCGAAGAACGAGGCTGCCGCTGCTGAGCAACACGCCAGCAACGTGGAGACTCTGGCCTCTCAGGCTCAGACTGCTGCGGCTGCTGCTGAAACCAAAGCTACCCGCGCAGAGACTAAAGCCGATCAGGCTGTGGGCACTGCAAACGCGATTGACGGCAAAGCCACTCAGGCCATCAACACCGCCAACCAAGCTACGGCCACTGCGAACTCCGCGAAGTCCACGGCTGATGCGATTGACGGCAAAGCACAGACGGCGATCAACACTGCCAACGCAGCTACCGAGACAGCGAACCAAGCCAAAAGCACTGCCGAGGCTATCGACGGTAAGGCGACCACTGCACTGGCTAACGCTGAGACGGCAATCGGAACCGCCAACCAAGCGGTTATCACTGCTGCCGACGCCAAGGATCTTGCCACTCAGGCAAACTCCAACGTTGCGGGCAAGGTCAACCGATCCGGCGACACGATGACAGGACTGCTCACCAATACTACAGGCTTCCAATCTAGCGGTACTGGTGGTGCGACTACGGGGCCGTTCTTCGAAATGCACTGGCCGGGCCAATCGGCAGGTATGTGGTATCTGAACAACAGCGGCCAAGTCACCTTGGCGCAGACGGGCGGTAACGGCACCGCCGCGCAGAACTACTTCCACATCAACATGTCTGATGGCTACCTTCTGCACCGGAAAGCCGGTCGGGTTATGGGCACGCTCACAGTGGATGGCGGGCTGTACAGCAACCAGTGGAACCCTCAGTCGGGCGGTACGCTCACCGCTAACGGTACGCTCCGAGTTCAAAACTCGGTGGTCGAAGTAAGCGGCGTCTTTCGCACCCGCGCACCTAACGGGGCGAACGCACACTTCTTCTTCGAGAATGCTGACGGCTCTGAGCGAGTGCTGATGCACGCTGACACCGCGCACAACTTCAACATTCGAACCTCCGCTGGCGCCACTGCTGTGACTATCCGTAACTCGGACAAGGGCATGACCGTGACTGGCGGCATTAACTGCGCAGCGCTGGCCTCTGGCGGTCGGGTACAAGGCAGCGACGTGCTATCCGTCGGGTACGTGTACGCAGGTTCCGGTAACGCTTACCTCGCAACAAACGGCAACGTCTACGGCCCCGCGTGGGGCGGCTGGCTGTCCGACTGGATAAACGGCAACTTCATCAGCCTTGGCAACTTCCGCGCCAAGTCGGCGGAGTACTTCTCGGCTAACCAGATCGGCTCGTACTGCTTCTTGCAGAACGTGTCCGGTGTGAACCAAGGCCAGAACGGTTTGCTGGACGGGCCTAACCTGCGGCTGTCGTCGCACAACAACGTATCGGGCACTGCCCCGGAAGGGACGTGGCGCTGCCTCGGCTGGTGCAACGCCGGTGGTGTGTCCGTTTGGATCCGAGTTTACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ff637e3c489245260ac7d6e0f2db3ac5b448c3e2daae57da008f97ec18f6ae65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6520
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50