Protein

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Genbank accession
YP_009847091.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPTFRVRGIGKVGTIKDLPPFELPPEAWSTSNNVRFVGGRIEKMGGTLPVLTTNMPDETPLCVFQKSNTNSIIYGTPTSIYKVDGISHFKISRNLSSTPGQEDFYVYGASPEDRWYYTSLSNSIIMNYKGDNPQGLRPTDDYFVNLPGWGVPSKDGVQKTWRCGRIRAFRNYLIALDMVENGVELPQRVRWSNVSFVNELPPDWVEDDDKRDGGFNDLTDSIGKIVDGHPLRDSFVVYTDKDTYLMDYVGGVFIFNFRKLFSDSGLLAPNCVAEFEGQHFVVAQDDIFIHNGSSRKPVASGRLKEFLINEISGINSQATQVFSNTSRKEIWITYAGTGSLGADKTGWSCNKAAVWNWEYDTWSFYDLPQVYDINMAPPPETGTLSWDQLCGTEANPPDDSIIPPGCEDLWDADKWAEVQWEEYGKDFIRRVIYCASKDKCLYLLDTGTEFTDYDSVTKTNKPRPVVAELVRTHLDMDEAVESTRRYKMVRHIIPQFSGTGEVFVFYGGSENSTNPPTWDGYQVYNIEEDVKVDSWSNNRYPAIKFVDSSGGTWSFTGYDIDFIQEGLR
Physico‐chemical
properties
protein length:568 AA
molecular weight: 64306,00750 Da
isoelectric point:4,75165
aromaticity:0,12852
hydropathy:-0,47007

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009847091.1
1 568
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,7398
Central domain 91 311 222 0,1422
C-terminal 312 568 256 0,7183
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-311
C-terminal
312-568

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4_4572
[NCBI] 		2588517 Uroviricota > Caudoviricetes > Grimontviridae > Lahexavirus lv44572 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009847091.1 [NCBI]
Genbank nucleotide accession
NC_048773.1 [NCBI]
CDS location
range 41124 -> 42830
strand -
CDS
ATGCCAACGTTTAGAGTTAGGGGGATTGGTAAGGTGGGTACTATAAAAGATTTACCGCCTTTCGAACTCCCACCAGAGGCATGGTCTACTTCCAACAATGTAAGATTTGTAGGTGGAAGAATTGAAAAGATGGGGGGTACACTCCCCGTCTTAACAACGAATATGCCAGATGAAACACCTTTGTGTGTTTTTCAGAAAAGCAATACCAATTCAATAATTTATGGTACACCAACCTCTATTTACAAAGTTGATGGTATTTCTCACTTCAAAATTAGTCGGAATTTAAGTTCGACGCCAGGCCAAGAAGATTTTTATGTGTATGGTGCATCCCCCGAAGACCGGTGGTACTACACATCTCTTTCTAATTCAATCATCATGAACTATAAGGGGGATAATCCACAGGGATTAAGGCCAACAGATGACTACTTTGTTAATCTTCCAGGTTGGGGAGTTCCTTCTAAGGATGGTGTTCAGAAGACTTGGAGATGTGGAAGGATCAGGGCTTTCAGAAACTACCTAATCGCATTAGATATGGTTGAGAATGGAGTTGAACTTCCACAACGAGTTAGGTGGTCTAATGTATCTTTTGTTAATGAACTTCCACCAGATTGGGTTGAAGATGATGACAAAAGAGATGGTGGTTTCAACGACCTAACCGATTCAATTGGGAAAATTGTAGACGGTCACCCATTAAGGGATAGCTTTGTGGTCTATACAGATAAAGATACCTATTTAATGGATTATGTAGGTGGTGTGTTTATCTTTAACTTCAGAAAGTTATTCAGTGATTCTGGACTATTAGCCCCAAATTGTGTAGCAGAGTTCGAAGGTCAGCACTTTGTTGTTGCACAGGATGACATCTTTATTCACAATGGATCCTCTAGAAAACCTGTTGCTTCTGGGAGATTAAAAGAATTTTTAATAAATGAAATTTCAGGTATAAACTCTCAAGCTACTCAAGTGTTTTCAAATACCTCAAGAAAAGAGATTTGGATAACTTATGCTGGCACTGGTTCTTTAGGTGCTGATAAAACTGGCTGGTCTTGTAACAAAGCTGCTGTATGGAACTGGGAGTATGATACTTGGTCGTTCTATGATCTACCTCAAGTCTACGATATTAATATGGCCCCTCCTCCCGAGACTGGTACGCTGAGTTGGGATCAATTGTGCGGTACTGAGGCTAATCCTCCAGACGACAGTATCATTCCACCTGGATGTGAGGATTTGTGGGATGCAGACAAGTGGGCAGAGGTTCAGTGGGAGGAATACGGAAAGGATTTCATCAGAAGGGTTATTTATTGTGCAAGTAAAGACAAGTGTTTGTACTTATTAGACACAGGTACTGAGTTCACTGACTATGACAGTGTTACAAAGACAAATAAACCAAGGCCAGTTGTTGCTGAACTTGTTAGAACCCACTTAGACATGGATGAAGCTGTTGAATCTACAAGACGTTATAAAATGGTACGACACATAATTCCACAATTCTCAGGAACTGGTGAGGTTTTTGTGTTTTATGGAGGGTCAGAGAACTCGACTAACCCACCAACTTGGGATGGTTATCAAGTTTATAATATAGAAGAGGATGTTAAGGTTGATTCGTGGTCTAACAACAGATACCCAGCTATTAAATTCGTAGATTCATCTGGTGGTACATGGTCATTCACTGGTTATGATATAGATTTTATACAAGAAGGACTGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c0837aea53d6b49c26b8189b082209737b0094c2186529b826710af973c27a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W., Bai,M., Wang,Y. and Cui,X. 2019-07-05 — GenBank