Protein

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Genbank accession
XWX33940.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MESLVGLIKEGYIMDFKQVFLYDGTPYLAFRGSDGEYDYPNDEWTETPPPEGLYEPIYFNGNEWKGASKEEWEKSIQKKKEEELSKLPPYEPTPIERLAATSQLQTAKTARRLQTLEQTQAKSLVNDAEKDRKIKVLEEQVARLMLELTKKGSVE
Physico‐chemical
properties
protein length:155 AA
molecular weight: 17895,97400 Da
isoelectric point:4,90284
aromaticity:0,09677
hydropathy:-0,85742

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_46
[NCBI] 		2815630 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX33940.1 [NCBI]
Genbank nucleotide accession
MZ417336.1 [NCBI]
CDS location
range 35813 -> 36280
strand +
CDS
ATGGAGAGTTTAGTTGGACTAATTAAGGAGGGTTATATAATGGATTTTAAACAAGTTTTTTTATATGATGGAACACCATATTTAGCATTTCGTGGCTCCGATGGGGAATATGATTATCCTAATGACGAGTGGACAGAAACTCCACCACCAGAAGGATTATATGAGCCTATATATTTTAATGGGAATGAGTGGAAAGGTGCAAGTAAAGAAGAATGGGAAAAGTCTATACAAAAGAAGAAGGAAGAAGAGTTATCTAAACTTCCACCGTATGAACCAACACCTATAGAACGTTTAGCTGCAACGTCACAGTTACAAACTGCTAAAACAGCAAGAAGACTACAGACATTGGAACAGACACAAGCAAAAAGTTTAGTCAACGATGCTGAAAAAGACAGAAAGATAAAAGTTTTAGAAGAGCAAGTGGCTAGATTAATGCTTGAATTAACTAAAAAAGGAAGTGTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f7684ce46e8fcd3d709de43f9fccc21ec2af078ccc9405f795c0ada4c17dc78
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank