Protein

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UniProt accession
A0A8S5SES3 [UniProt]
Protein name
Pulmonary surfactant-associated protein D, c-type lectin, alpha-helical coiled
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADKKITELTEATQLQDNDIFPIVQNSETKRITVANARAKFKGDKGENGQDGQQGPAGPAGTSINCVKVTDEQTAISQSAANPNNIYYW
Physico‐chemical
properties
protein length:89 AA
molecular weight: 9613,46610 Da
isoelectric point:4,92296
aromaticity:0,05618
hydropathy:-0,76854

Domains

Domains [InterPro]
DC_0729
ATT
1–37
DC_0729 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
55–84
G3DSA:1.20.5.320
A0A8S5SES3
1 89
Architecture
ATT
STR
ATT 1-37 | STR 41-84 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ct8mY9
[NCBI] 		2827664 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF49424.1 [NCBI]
Genbank nucleotide accession
BK032581 [NCBI]
CDS location
range 33483 -> 33752
strand +
CDS
ATGGCAGATAAAAAAATTACCGAATTAACTGAAGCTACTCAACTACAAGACAATGATATTTTTCCAATCGTTCAAAATTCCGAAACTAAAAGAATTACAGTAGCAAATGCAAGAGCAAAATTCAAAGGCGATAAAGGTGAAAATGGACAAGATGGACAACAAGGTCCAGCTGGTCCAGCAGGAACAAGTATAAATTGTGTAAAAGTAACAGATGAACAAACCGCAATATCTCAAAGTGCAGCAAATCCTAATAATATTTATTATTGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9eaf83e15d6e40b45b467c59a99ffd72f6bcf4183534c7be53694a3a28a7fc6d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7912
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50