Protein

View in Explore
Genbank accession
XYM49347.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGNPTDTTMEVRAYIPVGVDFQNKPNSLVAPAVIQKQFNFHGGDSGVRVVITDSEGTIFVKIGTAHEGWQPSGSWKKHNGDALPAPVAEPLTQIPDNTDLLTYFRSAPSGKYYSSTRVRRAPNQRDLDKEKWFNYEVTRHSGEHSQDVYILCMSGRGSLFTATIDNKGQWNDWKPLLGSARLAELNDDGFNFTMPQDNEYHARFRHGLEHVVFEGGHVSDLDKQKIKITGYNGHPLQELDITMVDGKRPTVNGQPLIPDNVTITPDVKDVGTLGGQGDENEDPKADFWGNPAPSIRILTAKVVGQFTDLPEGIVDPKGIITKYIKVNGNDALLRYVTEDGHEYVRTKIDGEWASHWHEIGAHAASHISSGGMSQGEADARYLRRDGSDQIMVDNVAGAVNLNKPRSSSFQQENSQRALTNKKYVDETFFKQGSETLMIGTGDDAASFDSAARSWTYPDKPWTVHFGDTTAMEYEDSSKSVNINKPRAIGPQDTADNALVQNQTLRLTTEQTAAYTDISQTAIKGGIDYNKSFNFIRFKGRPNYTLSLQRARQNAVFVVVNIGTQSERITIDSPAGVTINGISSKIVGNGEEVWLLYDAPNNNFVIFDEKHHHVDVSFDDGSGHSTRVPLKLLRVWSDSPIAQLNDQHGALLLDLRTHPKSDQTPPDHDEWPEAQSDEPGLLTKATNIGHLSYFAEQRVASMAHVTPAGQPETRIIPRSPIVDHPYIDYNTDLRQWTLYPLGSMSETPETQYAVAVQLMPFGLIPEGSNIYAYLYDDTNDHFLMDDDGQPIGTQIRQGNTANVQPILLAGITSVSVPTKVSLHVEYDGNPQTVVEIGATDYLKSGVMFQAITKTAKTGFAKLQFEADTDNAFKLQHFTHPQSIGNASPVINSGLAEKIYGNKFKKTFLGNLYFETYIDTHFGVTTVGGVSSLNMYATASDGGNSQHALGFVIDSKDASHLVGQNYTLHLKASNTRHYALRVYEWKGDNFRQENIPTFITNEADLGNPASAVTYNPQWHLLHEIDIPVSQTDVVYEYKESVPIICKGLAFVLVPHTYDPDLDEMFGGVSIKEYHVLLDHPFNEYRYTLLNKTPDSVLLSTRVARYAYSHPIQGNIYETIPVVAERYETGTRVADASKNDSFVTVIDDSIGRKTFKATKQCTVKITANVQVKSKTLAVGEATHLELGWSKNSGDPRMTLTVIPETLRSVSVVGSEHVQQVRQSWELTLEAGELFSLVMGVSKADTLYLYEPANSPAITYELMESDA
Physico‐chemical
properties
protein length:1263 AA
molecular weight: 139927,31130 Da
isoelectric point:5,38654
aromaticity:0,09026
hydropathy:-0,44972

Domains

Domains [InterPro]
DC_0389
STR
13–1263
DC_0389
XYM49347.1
1 1263
Architecture
STR
STR 13-1263
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BD1
[NCBI] 		3411689 Viruses >
Host Vibrio vulnificus
[NCBI] 		672 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM49347.1 [NCBI]
Genbank nucleotide accession
PV244424.1 [NCBI]
CDS location
range 1125 -> 4916
strand -
CDS
ATGGGTAATCCTACTGATACAACTATGGAAGTACGGGCATATATCCCTGTTGGTGTAGACTTCCAAAACAAACCTAATAGCCTAGTTGCACCTGCTGTAATACAGAAGCAATTTAACTTTCATGGTGGTGACTCCGGTGTACGTGTTGTAATTACCGACTCCGAAGGTACTATCTTCGTTAAGATTGGTACTGCTCATGAGGGTTGGCAGCCTTCAGGCTCTTGGAAGAAACACAACGGTGATGCATTACCTGCCCCTGTTGCTGAGCCTTTGACTCAGATTCCAGACAATACTGATTTGCTGACATACTTCCGTTCTGCACCAAGCGGTAAGTACTACTCATCTACCCGTGTACGACGTGCACCTAATCAACGCGACTTAGACAAAGAGAAGTGGTTTAACTATGAAGTAACTCGTCATAGTGGTGAGCACTCTCAGGATGTGTACATCTTGTGTATGTCTGGTCGTGGTTCTCTCTTTACTGCTACAATCGATAACAAAGGACAGTGGAATGACTGGAAACCACTACTAGGTTCTGCACGTCTAGCAGAGCTTAATGATGATGGCTTCAACTTCACCATGCCTCAAGACAATGAATACCACGCTCGTTTTCGTCATGGACTAGAGCATGTTGTCTTTGAGGGAGGTCACGTCTCTGACCTAGATAAGCAGAAGATTAAGATTACAGGGTACAATGGACATCCACTGCAAGAGCTGGACATCACAATGGTTGATGGTAAACGCCCTACTGTCAATGGACAACCACTGATACCTGATAACGTAACTATCACTCCTGATGTCAAAGATGTTGGTACGCTTGGTGGTCAAGGAGATGAGAACGAAGACCCTAAAGCTGACTTTTGGGGAAATCCAGCACCTAGCATTCGCATCTTAACTGCTAAGGTTGTAGGTCAATTCACTGACTTACCTGAAGGTATTGTTGACCCTAAAGGTATCATAACTAAGTACATCAAGGTAAACGGCAATGATGCACTTCTGCGTTACGTAACTGAAGATGGACATGAGTATGTGAGAACAAAGATTGATGGTGAGTGGGCATCGCACTGGCATGAGATTGGAGCACACGCAGCCTCCCATATCTCATCAGGTGGTATGTCACAAGGTGAGGCAGATGCTCGATATCTTCGTCGTGATGGCTCAGACCAAATAATGGTAGATAATGTTGCTGGTGCAGTAAACCTAAACAAGCCTCGTTCTTCTAGCTTCCAACAAGAGAACTCACAACGTGCACTTACTAACAAGAAGTATGTTGATGAGACCTTCTTCAAGCAAGGCTCTGAGACCTTAATGATAGGGACAGGGGATGATGCTGCAAGCTTTGATTCTGCTGCTCGTTCATGGACTTACCCAGATAAGCCTTGGACTGTACACTTTGGTGATACAACTGCAATGGAGTATGAGGACTCATCTAAGTCTGTAAACATCAATAAACCACGTGCCATAGGTCCTCAAGATACGGCTGACAATGCACTTGTTCAGAATCAGACACTACGTCTTACAACAGAGCAGACAGCAGCTTATACTGATATCTCACAAACAGCAATCAAGGGTGGAATAGACTATAACAAGTCATTCAATTTTATCCGATTTAAAGGAAGACCTAACTACACTTTGTCTCTTCAACGTGCCAGACAAAATGCAGTGTTTGTTGTTGTCAATATAGGTACTCAGTCAGAGAGAATCACAATTGACTCACCTGCTGGTGTTACTATCAATGGGATATCAAGCAAGATTGTAGGTAATGGTGAAGAGGTTTGGTTATTATATGACGCACCTAACAACAACTTCGTAATCTTTGATGAGAAGCATCACCATGTTGATGTATCATTTGATGACGGTAGTGGCCATTCAACTCGTGTACCACTGAAGCTTCTTCGTGTTTGGTCTGACTCTCCTATTGCACAACTGAATGACCAACATGGTGCATTGCTTCTGGATTTACGTACACACCCTAAGAGTGACCAAACACCGCCCGACCACGATGAATGGCCTGAAGCTCAGAGCGATGAACCTGGTCTATTAACTAAGGCTACTAATATTGGACACCTGTCTTACTTCGCTGAACAACGCGTAGCATCAATGGCACACGTTACTCCTGCTGGACAACCTGAGACTCGTATCATACCACGTAGTCCAATAGTAGACCATCCGTACATCGATTATAACACTGACTTACGTCAATGGACATTGTACCCTCTTGGCTCTATGTCAGAGACTCCAGAGACTCAATATGCTGTAGCTGTTCAGTTAATGCCATTTGGTTTAATCCCAGAGGGCTCTAACATCTATGCCTATTTGTATGATGATACCAATGACCACTTCCTTATGGATGATGATGGTCAACCTATTGGTACTCAGATTAGACAAGGTAACACAGCTAATGTTCAACCTATTTTGTTGGCTGGTATCACAAGTGTGTCTGTGCCCACTAAGGTAAGCCTTCACGTTGAGTATGATGGCAACCCACAGACAGTTGTTGAGATTGGTGCTACTGACTACCTTAAATCGGGTGTCATGTTCCAAGCTATCACCAAGACAGCTAAGACGGGTTTTGCTAAGCTACAATTTGAAGCAGATACAGACAATGCATTCAAACTTCAGCACTTCACTCACCCTCAGTCAATAGGTAATGCTTCTCCAGTAATCAACTCAGGATTAGCTGAAAAGATTTATGGTAACAAGTTCAAGAAAACCTTCCTAGGTAACTTGTACTTCGAAACATACATTGATACTCACTTCGGTGTTACTACTGTAGGTGGTGTTAGTAGTTTGAACATGTATGCTACTGCTAGTGATGGTGGTAACTCGCAGCATGCACTTGGCTTTGTTATTGACTCTAAGGATGCATCCCATCTAGTAGGTCAGAACTATACACTACATCTTAAGGCTTCTAATACACGACACTATGCGTTACGTGTATATGAGTGGAAAGGAGATAATTTCCGTCAGGAGAACATACCTACCTTTATTACTAATGAAGCTGACTTAGGCAATCCTGCTTCTGCTGTTACATATAACCCTCAGTGGCATTTGCTGCACGAGATTGATATCCCTGTATCGCAAACTGATGTAGTTTATGAATATAAAGAGTCGGTGCCTATCATCTGTAAAGGGTTGGCGTTTGTCCTTGTACCCCATACGTATGACCCTGATTTGGATGAGATGTTTGGTGGTGTGTCCATTAAGGAGTATCACGTTCTTCTGGACCATCCATTCAATGAGTACAGATACACGCTTCTTAACAAGACACCGGATTCAGTCCTGTTAAGCACTCGTGTTGCACGCTATGCATATAGTCACCCAATCCAAGGTAATATCTATGAAACAATCCCAGTGGTTGCTGAGAGATACGAAACGGGTACTCGTGTGGCTGATGCAAGTAAGAATGACTCTTTCGTAACCGTCATTGATGATTCAATAGGTAGAAAGACATTCAAGGCAACTAAGCAATGTACTGTCAAGATAACAGCGAATGTTCAAGTCAAGAGCAAGACACTGGCAGTCGGTGAGGCCACACACCTTGAATTGGGTTGGTCCAAGAATAGCGGAGACCCTCGAATGACATTGACGGTTATTCCTGAGACTCTGCGGTCTGTGTCTGTTGTTGGGAGTGAGCACGTGCAACAAGTTCGTCAGTCATGGGAACTAACATTGGAAGCAGGTGAGCTGTTCTCACTTGTTATGGGCGTTTCTAAAGCTGATACTCTATATTTGTACGAGCCAGCTAACTCTCCAGCAATCACCTATGAACTGATGGAATCTGATGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4fc65d8d730d872502a089c60b1b797c8a81702396018ff4aa8bbb44c0d91133
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3335
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50