Protein

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Genbank accession
WJZ48166.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLTKVSYSMIDGATINVRDFGAVGDGVVDDTAAIQAAIDFALANSVYYTKEFRIDFPTATYKTTGTLRIDGNTKAIVLVGYGMAEIAYNGTGDCIYIGNDTSFGVMPVEIHNLALIQTGTAQTGNGLRVQHSAYSVFKNLNIRNFNNGVLNQGSIGVIYDFQGKGIYNCNYCIVMDSSQPTGGGLRFDSNLCQLLNCYIAAKQYGVTIQPKTGVSPFNAGGLIRLRNCVFEGFAAGASAAVEVIANGEVSELDEVLIDHCWFEGYGLKALNMTNAKVHMTHCFITQCPGQVIVLNDNLCQLNIEHCYGYFNDAPPASGAIIEFGGTATAAVMSNVRWYRNLFSAAPLIYPSFPLNTINSTGQPFERVQQSFIIQYDAVYPIGNNDSNYGLALELFTEANKVFGLGWQVATVTFAGNDGSSNLGFATFKLYKVGAGFRTIDLSGTGATGYTLTNASASNSTCTFNNDGTGRWFKMQGSWVREN
Physico‐chemical
properties
protein length:483 AA
molecular weight: 52058,04400 Da
isoelectric point:5,18607
aromaticity:0,11594
hydropathy:0,04224

Domains

Domains [InterPro]
DC_0666
STR
1–481
DC_0666
IPR012334
STR
7–345
IPR012334
IPR011050
STR
13–366
IPR011050
IPR024535
ENZ
16–216
IPR024535
WJZ48166.1
1 483
Architecture
STR
STR 1-481 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJZ48166.1
1 483
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9304
Central domain 30 360 332 0,9902
C-terminal 361 483 122 0,9757
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-360
C-terminal
361-483

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage DSL-LC05
[NCBI] 		3058959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gammaproteobacteria
[NCBI] 		1236 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ48166.1 [NCBI]
Genbank nucleotide accession
OR003940.1 [NCBI]
CDS location
range 23329 -> 24780
strand -
CDS
ATGTCTTTGACAAAAGTAAGCTACTCGATGATTGATGGGGCAACCATCAACGTCAGGGATTTTGGCGCTGTTGGTGATGGCGTTGTTGACGATACGGCTGCCATACAAGCTGCCATTGATTTTGCGCTGGCAAACTCTGTGTATTACACAAAAGAGTTTCGTATCGACTTTCCGACTGCGACATACAAAACAACCGGAACGCTGAGAATCGACGGCAATACAAAGGCCATTGTGCTCGTGGGGTACGGTATGGCTGAGATCGCCTACAACGGCACGGGTGACTGCATTTACATTGGCAACGACACATCGTTTGGTGTCATGCCTGTTGAAATCCACAATCTTGCGTTGATTCAAACTGGTACGGCTCAAACAGGAAACGGACTTCGGGTTCAGCACTCAGCTTACTCTGTGTTCAAGAACTTGAACATCAGAAACTTCAACAATGGTGTTTTGAACCAAGGCAGTATCGGCGTAATCTACGATTTCCAAGGCAAGGGCATCTACAACTGCAACTATTGCATCGTGATGGATTCGTCTCAGCCCACTGGTGGTGGCTTGCGTTTTGACTCAAACCTTTGCCAACTGTTGAACTGCTACATTGCGGCCAAACAATACGGCGTCACCATTCAACCAAAAACAGGCGTAAGCCCGTTTAATGCTGGCGGTTTGATTCGTTTGCGGAACTGTGTTTTTGAGGGTTTTGCTGCTGGCGCATCTGCTGCTGTTGAAGTAATTGCAAACGGTGAAGTTTCTGAGTTAGACGAAGTTTTGATTGATCATTGCTGGTTTGAAGGCTATGGCTTGAAGGCGTTGAACATGACAAACGCCAAGGTGCATATGACGCATTGCTTCATTACACAGTGCCCCGGTCAAGTGATTGTTCTTAACGACAACCTTTGCCAGCTCAACATTGAGCACTGCTATGGGTACTTCAACGATGCGCCTCCAGCGTCTGGGGCAATCATTGAGTTTGGAGGAACAGCAACTGCTGCGGTGATGTCAAATGTCCGGTGGTACAGAAATCTTTTTTCTGCTGCTCCGTTGATTTATCCCAGCTTTCCATTAAACACAATCAACTCGACAGGTCAACCGTTTGAGCGTGTTCAGCAGTCTTTCATTATCCAATATGATGCCGTGTATCCAATTGGCAACAATGATAGTAACTATGGATTGGCGCTTGAATTGTTCACCGAGGCAAACAAGGTTTTCGGTCTTGGGTGGCAAGTGGCAACAGTGACTTTTGCTGGAAACGATGGCAGCAGTAATTTAGGTTTTGCCACGTTCAAACTCTACAAAGTCGGCGCAGGCTTCAGAACTATTGATTTGTCCGGTACTGGCGCAACGGGTTACACGTTGACAAACGCTTCTGCATCAAACAGCACTTGTACTTTCAACAACGACGGAACAGGTCGGTGGTTCAAAATGCAAGGCTCGTGGGTTCGAGAAAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d156779c4b26ee20c6c42f1dce1a1758f3b9d17ff743c3a1b346087f89519919
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6717
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50