Protein

View in Explore
Genbank accession
YP_010300549.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MVEKVDITLLKTNASGPVVATQGGVSVDIEEDYSTLSGSFDQLTGVLALNIPTIGKLQIAGLPTIHSIGYGPEGGVGASGRDGLDGLMGGDGRRGTDGCPGPRGSDGNQGKQGYVGNRGPAGPTGPIGPTGAPGNPGKVMVFVQDTDPAIDNEIEAGAIWVRP
Physico‐chemical
properties
protein length:163 AA
molecular weight: 16292,97180 Da
isoelectric point:4,50394
aromaticity:0,03681
hydropathy:-0,21902

Domains

Domains [InterPro]
DC_1829
ATT
1–68
DC_1829 IPR008160
YP_010300549.1
1 163
Architecture
ATT
STR
ATT 1-68 | STR 87-138 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_2
[NCBI] 		2869547 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010300549.1 [NCBI]
Genbank nucleotide accession
NC_061443.1 [NCBI]
CDS location
range 72074 -> 72565
strand -
CDS
ATGGTAGAGAAGGTTGATATTACGCTACTCAAGACTAATGCTTCTGGTCCTGTAGTAGCGACTCAAGGCGGCGTGTCCGTCGATATCGAAGAAGACTACAGCACACTTAGTGGGTCGTTTGACCAACTGACTGGTGTGCTCGCACTGAACATCCCTACAATCGGTAAGCTGCAAATCGCAGGGCTGCCTACTATTCATAGCATCGGCTATGGACCTGAAGGTGGCGTAGGTGCTTCCGGGCGAGATGGTCTTGATGGTCTGATGGGCGGTGACGGTCGTCGTGGTACTGATGGTTGCCCGGGCCCGCGTGGTTCAGACGGTAATCAAGGCAAGCAGGGCTATGTCGGTAACAGAGGTCCTGCGGGTCCTACTGGTCCTATAGGCCCAACAGGTGCTCCCGGCAACCCAGGTAAAGTGATGGTCTTTGTGCAAGACACTGACCCTGCCATCGACAATGAGATCGAAGCTGGTGCCATCTGGGTCCGTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9090367577d2aa8ff680856ef8f4c00af8fbf2945f91dec26fc48f783bb62f7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_2 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank