Protein

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Genbank accession
YP_009220207.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MAETLLFRGGSTADVNDAATTVSSREIVIDTDTNQIVSGPNKKRTIMNGDGITIDPNNVAISTNGQGRLSIDSSGRLLVGTSSIASGGYVVAESAHFLVQGRVGSSTDSGRINIQRGSVPTISNQGIGGIYFTDSSNNGYASIESSSDGTTGTNDYPGRLVFSTTADGASSPTERMRIDSSGTVLIGKTSSNFTVNGCELSSTGGVFTRTAEAITINRQGSDGIAAVLRRSNVTVGSISVTTSATAYNTSSDYRLKENVVPLTGAVDRLKQLPVRRFNFIADPDTTVDGFIAHEAQAVVPECVTGAKDEVDADGNPVYQGIDQSKLVPLLTAALQEAMERIEVLEAKVNALEGN
Physico‐chemical
properties
protein length:354 AA
molecular weight: 36899,28610 Da
isoelectric point:4,75693
aromaticity:0,04520
hydropathy:-0,18475

Domains

Domains [InterPro]
DC_0435
ATT
1–48
DC_0435 DC_1367
IPR030392
CHP
251–348
IPR030392
IPR030392
CHP
251–303
IPR030392 Coil
YP_009220207.1
1 354
Architecture
ATT
RBD
ATT 1-48 | RBD 94-354
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009220207.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,3226
Central domain 37 235 200 0,1180
C-terminal 236 354 118 0,9772
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-235
C-terminal
236-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBP42
[NCBI] 		461711 Uroviricota > Caudoviricetes > Autographivirales > Aegirvirus SCBP42 >
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009220207.1 [NCBI]
Genbank nucleotide accession
NC_029031.1 [NCBI]
CDS location
range 23169 -> 24233
strand +
CDS
ATGGCAGAAACTCTTTTATTCCGTGGTGGCTCAACGGCTGACGTTAATGATGCAGCTACCACTGTCTCTTCCCGTGAAATTGTAATTGATACTGATACCAACCAGATCGTCTCGGGGCCTAATAAGAAGCGCACCATTATGAATGGTGATGGTATTACTATTGACCCCAATAACGTAGCCATCTCGACTAATGGGCAGGGGCGGTTGTCTATCGACAGCTCCGGCAGGCTCTTAGTTGGCACGTCTTCGATTGCTAGCGGTGGTTATGTTGTTGCTGAATCTGCACACTTTTTAGTTCAAGGCCGCGTTGGTAGTAGCACTGATAGTGGCCGCATCAATATTCAGCGTGGGTCAGTCCCTACTATTTCTAATCAAGGTATTGGCGGTATTTACTTTACGGATTCTTCCAATAATGGTTACGCAAGTATTGAGTCGTCATCTGATGGAACCACTGGTACTAATGACTACCCAGGCCGCCTAGTGTTCTCCACTACTGCCGACGGAGCAAGCAGCCCGACGGAGCGGATGAGGATTGATAGCAGTGGAACTGTGCTTATTGGTAAAACATCTAGCAATTTCACTGTCAATGGATGTGAATTATCTTCGACTGGTGGCGTATTTACTCGGACAGCGGAAGCTATAACAATCAACAGGCAGGGAAGTGACGGAATTGCTGCTGTATTAAGGCGAAGCAATGTAACTGTTGGCTCAATTAGCGTTACAACATCTGCCACCGCCTACAACACCTCCTCCGACTACCGCCTGAAGGAAAACGTTGTCCCCCTAACTGGCGCTGTTGACCGCCTAAAGCAGTTGCCCGTACGGCGCTTCAACTTCATCGCGGATCCCGACACCACGGTTGACGGCTTCATCGCTCACGAAGCACAAGCCGTTGTACCTGAGTGCGTCACTGGCGCCAAGGATGAAGTGGATGCTGACGGCAATCCCGTCTACCAAGGCATAGACCAGTCCAAGCTGGTGCCTTTGCTGACGGCTGCGCTGCAGGAAGCAATGGAGCGGATCGAAGTGTTGGAAGCAAAAGTCAACGCCCTCGAAGGCAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a0ceab6e0182040cd07187bf3cf5842931c09cb8e41084b87024d95387eefa4a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50