Protein

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Genbank accession
XEC67429.1 [GenBank]
Protein name
HNH endonuclease
RBP type
TSP
Evidence DepoScope
Probability 0,92
Protein sequence
MNTAFDAIDFSVAMTNQLFTYDSKTGVIRLKSTGCKIGNINTADGGTRIECNGKTLSGARVAWIIATGNTIPPGFAVVCRQRTPGHYGNRISNLYLVDVARDTNFYA
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11567,00190 Da
isoelectric point:9,21597
aromaticity:0,09346
hydropathy:-0,08224

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEC67429.1
1 107
Domain Start End Length (AA) Confidence
N-terminal 1 81 81 0,0898
Central domain 82 96 16 0,0069
C-terminal 97 107 10 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-81
Central
82-96
C-terminal
97-107

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SM_A8
[NCBI] 		3236699 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEC67429.1 [NCBI]
Genbank nucleotide accession
PP920553 [NCBI]
CDS location
range 26558 -> 26881
strand -
CDS
ATGAATACTGCATTCGACGCAATCGACTTTTCAGTGGCAATGACCAATCAGCTATTCACATACGACAGCAAAACCGGAGTCATCCGTCTGAAGTCCACCGGATGCAAGATTGGCAACATCAACACCGCCGATGGCGGAACCCGTATCGAATGCAACGGCAAGACGCTGTCTGGCGCACGCGTGGCGTGGATTATTGCGACGGGCAATACAATCCCTCCAGGCTTCGCCGTTGTGTGCCGCCAGCGCACTCCAGGGCACTACGGCAACCGCATAAGCAACCTTTACCTGGTAGACGTTGCACGCGACACGAACTTTTATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8134021b2c79da02cc1fe91410814e9e0fe570c269375e4473138a736c31cbb3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Library of National Institute of Infectious Diseases Japan Azam,A.H. and Kiga,K. 2014-07-25 — GenBank