Protein

View in Explore

Genbank accession

XSB42519.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,95

Protein sequence

MEQFKKKKLPLLIAGSGGKKSSKSSSRTPVEADDTVNSRAMASILDLLGEGVIGGLVNGARSIFVDDLPIVNEDGSSNFSGISWDFRDGSQDQTPMSGFDFVETPKSINIQLKKSHYVTVSIDNDEADRVRVIMKFPSLRRIDQKTGDTNGTTVEYKFQISNGDSTFVDVVAEGEKNVGIKLTAKKTGAYYRSYELKLPKPGRAYSVRVVRITDDNSGQYLYNDTWVDSIGEIVDTPMNYPNSALVGLKVNSEQFGGSMPSRSYLVRGLKIRVPSNYNETSNTYDGVWDGSFKLLSSSNPAWILFDLLTNSRYGLGQYVSESMIDLGQLYQIGRYCDEEVDDGFGGKEKRFAINTQITSRQDAYRLIQDIAGAFRGMVFWAGGMVNIMQDSPSDPVMMFTNSNVKDGLFTYKGSARKDRPSVALVTYNNKEDGYKQNIEYVEDQDAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTARMESDVITFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVEFTKNSITLDAPVSLAKSGSFIRILNQEGKIVERDVLETGENITKVTFSKALSSAETPVLNGVWTITEPDLEPMRVRIVNIAQGETSGSFDITAVENNPSKYEAIDNGATLIPQNTTVLDPTYSKPSNLQITEGTYLSSPGNLSVKLTATWEGKSPEYWISWRRSDENNVSNWQSARVTEEQYEIVNVAENGRYDFQLYAVSFNGKKTEIISTVYQVLGTMTPPDAPTSLTAVGDYRNVILNWVNPDSVDLDHINVYASQTNNLDTAKLIAESASTTFTHAGLGDSETWYYWVRSANKRGMLSRPNSNLGTEATTRDVLSFLANKITSSELGQALNEEIDSKASQQAVDEINNHIDQSVESLEGEISALNKELTSSIDEFKTSFTERSETLENAQSELRTEVSSTREKVDDALRQVENSNAALIELRNTVSKQGDSVAGVVEAANAALENASSLIAEERKVRAQADLANAKKIETMRSSVDESVAAVEEMRRTVAEVGRVSSEITTNLEAISKTNIDLALRQDEDQHRQLVNNAKIATTQKILVDDVSAMASKVEEIRAEIGDNIRASILEEATARTDGDNALANRVTQLQSKFEGDISAAIRTEQSARASANETLSKQITQLESKVNTDISTAIREEQQTRATQDEALSRQITQLQTKVNNDISAAINEEREARASGDSALSREVSSLKTKTGKDIAAAVAVETKARTDANDALSRQISSLTTRANNLQSSIERESTSRTSQDSAIAKDLASFKTKTAKDISAAVAVETQARAAADTALTSQINSLKTQTGKDIKAAVAEETKARTDADAALSTRVTNLQSQTTNYINAAITSESKARTSADNALGKRIDTLKASVDGNVAVIQQQASAIADANRKVSTSYTLKMETSTSGGQKYVAGIALGIDTTGLSQFLVRADRFGLVNNVNGKITTPFVIENSVAYMNGAYIKDGTITNAKVGDLQSTNFVRGRAGWRFGKNGTLEINGNSGGNGRLVINGQRIDVYDDNNVLRVRIGRL

Physico‐chemical properties

protein length:	1535 AA
molecular weight:	167763,58320 Da
isoelectric point:	5,22432
aromaticity:	0,06189
hydropathy:	-0,45707

Domains

Domains [InterPro]

IPR053171
Unmapped
1–1133

IPR053171 DC_2230 IPR015406

DC_0129
STR
21–995

DC_0129 DC_0292 Coil DC_1281

IPR055385
ATT
102–236

IPR055385 IPR032876 IPR003961 IPR013783 Coil Coil Coil DC_0068

IPR003961
STR
645–745

IPR003961

IPR036116
STR
670–821

IPR036116

XSB42519.1

1 1535

Architecture

STR

ATT

STR

ATT

STR

RBD

STR 21-101 | ATT 102-236 | STR 237-358 | ATT 359-521 | STR 522-995 | STR 1019-1276 | RBD 1277-1535

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	1	1133	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	21	995	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	102	236	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	359	521	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	644	726	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	645	745	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	670	821	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	743	839	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
Coil	Unmapped	-	872	899	Coils	Coil	-	-	-	-
Coil	Unmapped	-	929	949	Coils	Coil	-	-	-	-
Coil	Unmapped	-	961	981	Coils	Coil	-	-	-	-
DC_0292	STR	DC_0292	1019	1137	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
DC_0068	STR	DC_0068	1115	1191	Novel HMM	DC_0068	Central	Low	Positional only	24 proteins / 24 hits
DC_2230	STR	DC_2230	1181	1276	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
Coil	Unmapped	-	1232	1252	Coils	Coil	-	-	-	-
DC_1281	RBD	DC_1281	1267	1535	Novel HMM	DC_1281	C-terminal	Low	Positional only	31 proteins / 31 hits
IPR015406	RBD	DC_0135	1384	1517	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage PhiR41_1 [NCBI]	3416483	Viruses >
Host	Escherichia coli str. K-12 substr. MG1655 [NCBI]	511145	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

XSB42519.1 [NCBI]

Genbank nucleotide accession

PV340561.1 [NCBI]

CDS location

range 62391 -> 66998
strand +

CDS

ATGGAACAGTTCAAGAAGAAAAAGTTACCTCTATTAATTGCAGGTTCTGGTGGCAAAAAAAGTAGCAAAAGCTCTAGTCGCACACCAGTTGAAGCAGACGATACCGTAAATTCTCGTGCTATGGCCTCTATTCTCGATCTTCTTGGAGAAGGCGTAATTGGCGGCTTGGTAAATGGCGCAAGATCTATTTTTGTCGACGATTTGCCCATAGTAAATGAAGACGGCTCTTCAAACTTTAGCGGAATTTCATGGGATTTTCGAGACGGCTCGCAAGACCAGACACCAATGTCTGGCTTTGATTTCGTCGAAACACCTAAATCGATCAATATCCAACTAAAGAAATCGCATTATGTGACGGTTTCAATAGATAACGATGAGGCCGATCGTGTTCGAGTCATCATGAAGTTCCCTTCTCTGCGAAGAATAGACCAAAAAACGGGTGATACAAACGGCACTACCGTTGAGTATAAGTTCCAGATCTCAAATGGAGATTCAACATTTGTAGATGTGGTCGCAGAAGGTGAAAAAAACGTTGGTATTAAGTTAACAGCGAAGAAAACCGGTGCTTATTATCGTAGTTATGAGCTGAAGTTACCCAAGCCAGGTCGGGCATACAGTGTTCGAGTAGTTCGTATTACTGATGATAACAGCGGTCAGTATCTTTATAACGATACATGGGTGGACTCAATCGGTGAGATCGTTGATACACCGATGAACTACCCAAACTCTGCGTTGGTGGGACTGAAGGTTAATTCTGAGCAGTTTGGCGGCTCTATGCCTTCTCGTTCCTATCTGGTGCGGGGATTAAAAATTCGCGTACCATCAAACTACAACGAGACTAGCAACACTTATGATGGCGTATGGGATGGCTCTTTTAAGCTGTTGTCATCTTCAAACCCTGCGTGGATTCTCTTCGACTTGCTTACCAACTCTCGATATGGGCTTGGTCAGTATGTGTCGGAATCTATGATTGATCTCGGCCAACTGTACCAGATCGGTCGATATTGTGACGAAGAGGTTGATGATGGCTTTGGTGGTAAAGAGAAACGCTTTGCAATCAATACGCAGATCACCAGTAGACAGGATGCATACCGACTAATTCAGGATATTGCCGGTGCATTCCGCGGCATGGTGTTTTGGGCTGGTGGCATGGTTAACATCATGCAGGATAGCCCATCAGATCCAGTAATGATGTTTACCAACTCGAACGTCAAAGATGGATTGTTTACCTATAAAGGTTCTGCGCGTAAAGATCGCCCATCCGTTGCGCTCGTGACCTACAACAACAAGGAGGACGGTTATAAGCAAAACATTGAGTACGTTGAAGATCAGGACGCAATGCGCCGTTATGGTGAGCGTAAAACAGAAGTCGTAGCATTTGGATGTACAAGCCGAGGCCAGGCTCACCGAGTTGGTTTATGGCTTTTGTATACCGCCAGAATGGAGTCGGATGTAATTACATTTACTGCCGGTTTAGACGCCTCGTTTCTGATGCCTGGTGAAACCGTTCTGATTCAGAACAAATATCGTGCAGGTAAACGTAACTCCGGTCGAATTGTGGAGTTTACCAAAAACAGCATCACTCTCGATGCGCCTGTGTCGTTAGCTAAAAGCGGCAGCTTTATTCGGATATTGAATCAGGAAGGCAAAATCGTTGAACGCGATGTTCTTGAAACTGGCGAAAACATAACAAAGGTTACGTTTTCAAAAGCTCTGTCGTCAGCGGAAACGCCTGTTTTGAACGGTGTATGGACAATCACAGAACCAGATCTCGAACCTATGCGCGTTCGCATCGTTAACATCGCTCAGGGGGAAACGTCGGGTAGCTTTGACATCACCGCTGTTGAGAACAATCCGTCTAAATATGAGGCAATCGACAATGGTGCAACGCTTATCCCGCAGAATACGACGGTATTGGACCCGACTTACTCCAAGCCGTCTAATTTGCAAATCACCGAAGGGACTTATCTCTCAAGCCCAGGCAACCTGTCAGTAAAACTGACTGCAACATGGGAAGGGAAATCTCCAGAGTATTGGATCAGTTGGCGACGTTCTGATGAAAACAATGTATCGAACTGGCAATCGGCACGTGTAACCGAAGAGCAATACGAAATCGTTAATGTCGCGGAGAATGGACGCTACGACTTCCAACTGTATGCGGTTTCATTCAACGGTAAAAAAACAGAGATTATCAGTACCGTTTATCAGGTGCTGGGCACAATGACACCGCCGGATGCACCAACGTCATTAACGGCAGTTGGGGACTATCGTAATGTGATACTGAATTGGGTCAATCCAGATTCGGTAGACCTTGATCACATTAATGTTTACGCATCCCAGACCAACAATCTGGATACGGCGAAACTGATCGCAGAGTCTGCAAGCACCACCTTTACACATGCTGGTCTTGGGGATAGTGAAACTTGGTATTACTGGGTTAGATCAGCAAATAAGCGTGGCATGTTGAGTCGCCCAAACTCAAATCTTGGTACAGAGGCCACAACGCGAGATGTTCTTTCATTTTTAGCCAATAAAATTACCTCGTCAGAACTTGGCCAGGCTTTAAATGAGGAAATTGACAGTAAGGCTTCTCAACAAGCTGTTGATGAAATCAATAATCATATCGATCAGAGCGTCGAATCTCTGGAAGGTGAAATTTCCGCATTAAATAAGGAGCTAACGAGTAGTATCGATGAGTTCAAAACATCGTTTACTGAACGCAGCGAGACACTGGAGAATGCGCAAAGCGAGCTTAGAACGGAAGTTTCTAGCACTCGGGAAAAAGTAGATGATGCATTACGACAAGTTGAAAATTCAAATGCAGCACTTATTGAACTACGTAATACAGTATCAAAACAAGGTGATTCTGTTGCTGGTGTCGTAGAAGCAGCAAATGCGGCACTTGAAAATGCATCATCTTTAATTGCCGAAGAGCGTAAAGTTCGTGCACAAGCAGATCTAGCGAATGCTAAAAAGATAGAAACGATGAGATCATCGGTTGATGAAAGTGTTGCGGCTGTAGAAGAAATGCGGAGAACGGTTGCTGAGGTAGGAAGAGTAAGTTCAGAAATCACAACTAATCTTGAAGCCATTTCTAAGACAAATATCGATCTTGCGTTGCGGCAGGACGAAGATCAGCACAGACAGCTGGTAAATAACGCGAAAATTGCCACGACTCAAAAGATTCTTGTCGATGATGTGTCAGCAATGGCGTCTAAGGTTGAAGAGATACGAGCCGAGATTGGTGACAACATTCGAGCATCTATTCTCGAAGAAGCGACAGCCAGAACTGATGGTGATAATGCGTTAGCCAATCGTGTGACACAATTACAGAGTAAATTTGAAGGTGATATCAGTGCCGCAATAAGGACCGAACAATCTGCAAGAGCATCGGCCAATGAGACTCTTTCAAAGCAGATCACACAACTGGAGTCTAAAGTAAATACTGATATTTCAACCGCTATTAGAGAAGAGCAACAAACAAGAGCAACGCAAGATGAAGCATTATCAAGGCAAATAACTCAACTTCAAACAAAAGTTAATAACGATATATCTGCTGCTATTAATGAGGAAAGAGAAGCCAGAGCATCAGGCGATAGTGCACTATCAAGAGAAGTTAGTAGTTTAAAAACAAAAACAGGTAAAGATATTGCAGCGGCGGTAGCAGTTGAAACCAAAGCAAGAACTGACGCTAACGATGCATTATCCAGACAAATTTCTTCTCTTACTACGAGGGCTAATAATCTTCAGTCCTCGATAGAGCGAGAATCGACATCTCGTACAAGTCAGGATTCTGCCATTGCAAAAGACTTGGCAAGTTTTAAAACAAAAACTGCTAAGGATATAAGTGCAGCTGTTGCGGTTGAAACTCAAGCAAGAGCTGCCGCTGATACCGCATTGACGTCGCAGATTAACTCACTAAAGACACAAACAGGTAAAGATATAAAGGCTGCTGTAGCAGAAGAGACGAAAGCCAGAACTGATGCTGATGCAGCGCTTTCGACAAGGGTAACTAATCTCCAGTCGCAAACAACAAATTATATCAATGCAGCGATTACGTCAGAGTCAAAGGCCAGAACAAGTGCAGACAACGCTCTAGGAAAACGAATTGATACACTGAAAGCGTCTGTAGATGGAAATGTTGCCGTTATTCAGCAGCAGGCTTCTGCTATAGCTGACGCTAATAGAAAAGTATCAACCTCGTACACATTGAAGATGGAAACTTCAACGAGTGGTGGGCAGAAGTATGTAGCGGGCATTGCGCTGGGTATTGATACAACGGGGCTTTCTCAGTTTTTGGTGCGGGCAGATCGATTTGGTTTGGTCAACAATGTTAATGGGAAGATCACAACGCCATTTGTTATCGAAAACAGCGTTGCGTATATGAACGGTGCTTATATCAAAGATGGCACTATCACAAACGCAAAGGTAGGTGACTTACAATCAACAAACTTCGTAAGAGGACGAGCCGGATGGAGATTTGGCAAAAACGGAACGCTTGAGATTAACGGTAACAGTGGCGGAAATGGGAGATTAGTTATCAATGGGCAGAGAATCGACGTTTACGACGACAATAATGTACTCAGGGTAAGAATTGGTCGACTTTGA

Genome Context

Tertiary structure

PDB ID

41ac1c8c26ff767599797dd42b928112f600cf3d2e0e60d77f5b5b37958417ba

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7488

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages	Brenes,L.R. and Laub,M.T.	2025	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature