Protein

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Genbank accession
AIZ01563.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYTTGNGVTATIPFTFPANSASDVYGAINGIDQSVTVVLSPDQINSPGGTLTFNGGAAPLGSSVLVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERSGKFLGFDPAGNPYAAAPIRGEDGTNGLPPYISDGTDGFNAGNWVAFSIQDNSYKDTGVRALGVDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37336,53730 Da
isoelectric point:4,28619
aromaticity:0,09804
hydropathy:-0,32717

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage H3
[NCBI] 		1558466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIZ01563.1 [NCBI]
Genbank nucleotide accession
KM612263 [NCBI]
CDS location
range 19367 -> 20440
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATACCACTGGTAACGGAGTGACGGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGACGTGTATGGTGCAATCAACGGAATAGACCAGTCAGTAACTGTAGTGCTGAGTCCCGACCAGATAAATAGTCCAGGCGGAACATTGACATTTAATGGTGGCGCGGCTCCCTTGGGTTCAAGTGTCTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCGTACCCGACTAAGGGCAGCTTTCCGTCCAAGTCACATGAGTCTGCTATGGATAAACTGGTGATGATTGCGCAGGACTTGAATTTCCTTTTAGCGTCTCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCTCCGGAAAATTTCTTGGCTTTGACCCTGCAGGCAATCCATATGCAGCAGCTCCGATTCGCGGCGAGGACGGCACAAATGGTCTTCCTCCTTACATCTCGGATGGTACTGATGGATTCAACGCCGGAAACTGGGTAGCATTCTCCATTCAAGACAACTCATACAAGGATACAGGCGTCCGCGCTCTTGGCGTTGATGGCTTACCTCCTTACATCTCGAATGGCACTGACGGATTTACGTCAGGAAACTGGATTGTCGACGACGGAAGCACTAACTATGTTGACACGGGAGTAAGGGCGAAGGGAGACAAAGGCGACAAAGGTGACGACGCTCTATCGCCTTATGTGTCTGATGGGACTGACGGATTCACCGCAGGAAACTGGGTCGCGGACAATGGCTCCGGTGCTTATGCGGACACAGGAATCGGGGCAAAAGGTGATAAGGGTGACACAGGCGACGATGGCCTACCGCCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAACGGCTCCGGTGTGTATGTTGATACAGGTATTCCTGCTCGACCGAATTTGCAATACGCCACAGAAACCACAATCGGCGGTATGCGTTGGTCATTGGTTGGGACTACTTTAAACTTGTATTTTACGGACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
38ad42ffc86217f4fde3fc3a2fff1827c37f8c0e911e86f29b6fcc08495d076f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of seven Vibrio cholerae phages isolated in China Bhandare,S.G., Warry,A., Emes,R.D., Su,J., Barrow,P.A. and Atterbury,R.J. — — GenBank