Protein

View in Explore
Genbank accession
WJJ53985.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTARGWEKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPVGFQLSYEIHDPSAVLTTGLTITPETANGEVGQVVELKAVVAPENATYQGVNWYSGDLTKAVHIGGGKFKLLAPGSVTVYGVTIEGDHTDSTVITVAGALSLSTDLAASQDVTTGESATFTIAATGGTTPYKHTWYFSDVPGGEGEVIDAGTNPTAATASLVITAVAAENEGEYWCVVEDADGHSVTSTRCEMAAV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 28052,86480 Da
isoelectric point:4,46086
aromaticity:0,05576
hydropathy:-0,06691

Domains

Domains [InterPro]
DC_0078
STR
1–192
DC_0078
G3DSA:2.60.40.1080
STR
86–170
G3DSA:2.60.40.1080 IPR013783
IPR008964
RBD
88–163
IPR008964 IPR007110
IPR003343
STR
91–158
IPR003343 DC_2066
IPR003599
STR
180–269
IPR003599
IPR036179
RBD
181–263
IPR036179
PF13927
STR
182–252
PF13927
cd00096
STR
191–262
cd00096
WJJ53985.1
1 269
Architecture
STR
STR 1-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV101
[NCBI] 		3053734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ53985.1 [NCBI]
Genbank nucleotide accession
OQ973471.1 [NCBI]
CDS location
range 23796 -> 24605
strand +
CDS
ATGCCAACGATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACTGAGCGTCTTCACACTGTAACAGGTACTGCTCGTGGTTGGGAAAAGACCAGTCTTAACCAAGACCCAGACGAGATCCTGACTGAGTGTAAAGGTCTGGATGCACTGCTGACCAAGAGCAATTTGCAGGCCGATGGCGTCACCAAAGTGGATCCAACCAAGCCCGTTGGCTTCCAGCTGTCTTATGAAATCCACGACCCAAGCGCTGTGCTGACCACTGGCCTGACCATCACCCCTGAAACTGCTAATGGTGAAGTCGGTCAGGTTGTTGAACTGAAGGCGGTCGTCGCTCCGGAGAACGCGACCTACCAGGGTGTCAACTGGTACTCTGGGGATCTGACCAAAGCTGTGCACATCGGTGGTGGTAAATTCAAGCTGCTGGCGCCGGGTTCAGTGACTGTTTACGGTGTAACCATCGAAGGTGACCACACTGACTCTACCGTCATTACAGTGGCAGGTGCTCTGTCTCTGTCTACCGATCTGGCTGCTTCTCAGGATGTAACAACAGGTGAATCCGCAACCTTCACCATCGCTGCTACAGGCGGCACTACCCCATACAAACACACTTGGTACTTCTCTGATGTCCCTGGTGGTGAAGGTGAGGTGATCGATGCTGGCACTAACCCCACTGCTGCAACTGCGAGCCTGGTTATCACTGCAGTTGCTGCCGAAAACGAGGGTGAGTACTGGTGTGTTGTTGAAGACGCTGACGGTCACTCTGTGACCTCTACTCGTTGCGAAATGGCTGCGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abadff59799dd4ec0d2be5654e749ba1a73fc8060c836718b13a3829123a0481
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A diverse collection of bacteriophages to be used for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Soerensen,A.N., Bojer,M.S., Bortolaia,V., Soerensen,M.C.H. and Broendsted,L. 2024-02 — GenBank