Protein

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Genbank accession
XCD04935.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSKEFLTVRDASNKLGLPGSTNTYTFITKGAAITAGADPDLLTGYGYNDFPVDDDIVRKVDNMEVLNSFLSVRSVYCRIGIVADPDDERIPFVYAASDFKNITFGVVVNGTMVTTSISLSGSTGYWYNIATSALSGNYLFCCSGSSSNANTQFRVYKLNTSNNTLTAIAAYTGSNFKYPRSFSYVEKIGNYHYAYFDVGGTYRYVARLYVNETNDSSSYDKGADVSPTMYSQVLTRESNGNYATFAKAETDNRYIRISSNWDYHSTQTSSLSLSYTPITEFFVRCLTYGSNKCINVGQSATLKYPCLCEIYSGTIVKNFGSVGIQPELINYKGDIWWTELNSSGNTYKKLT
Physico‐chemical
properties
protein length:351 AA
molecular weight: 38893,83520 Da
isoelectric point:6,16541
aromaticity:0,13960
hydropathy:-0,25413

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCD04935.1
1 351
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,9035
Central domain 16 214 200 0,3152
C-terminal 215 351 136 0,6595
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-214
C-terminal
215-351

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 41
[NCBI] 		3145759 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD04935.1 [NCBI]
Genbank nucleotide accession
PP511520 [NCBI]
CDS location
range 12661 -> 13716
strand +
CDS
ATGAGTAAGGAATTTCTGACTGTCAGGGATGCTTCCAATAAACTGGGACTTCCGGGCAGTACAAACACATATACCTTTATAACAAAAGGAGCAGCTATTACTGCCGGAGCGGATCCTGATCTTCTCACCGGATACGGATATAATGATTTTCCTGTGGATGATGATATAGTTAGGAAAGTGGATAATATGGAAGTGTTAAATAGCTTCCTTTCTGTCAGAAGTGTTTATTGCCGTATAGGTATTGTAGCAGATCCCGATGATGAAAGAATTCCATTTGTTTATGCAGCTTCTGATTTTAAAAATATTACTTTCGGAGTTGTGGTTAATGGTACGATGGTTACTACATCTATATCTCTAAGTGGTTCTACTGGATATTGGTATAATATAGCTACTTCGGCTTTATCAGGTAATTATCTATTTTGTTGTAGTGGATCTTCTTCAAATGCTAATACGCAATTTAGAGTATATAAATTAAACACATCTAATAATACTCTTACTGCTATAGCTGCTTATACTGGTAGTAATTTTAAATATCCGAGATCTTTTTCTTATGTAGAGAAGATTGGTAATTATCACTATGCGTATTTTGATGTTGGAGGAACGTATAGGTATGTAGCCAGATTATATGTAAATGAGACTAATGATTCAAGTTCTTATGATAAAGGTGCAGATGTCAGTCCTACTATGTATTCACAGGTTCTTACTAGAGAATCTAATGGTAATTATGCTACATTTGCTAAAGCAGAAACTGATAATAGATATATAAGAATTAGTAGTAATTGGGATTATCATTCTACTCAAACATCAAGTCTTTCTTTATCATACACTCCAATAACTGAATTTTTTGTTAGATGCTTAACATACGGAAGCAATAAGTGTATAAATGTAGGACAATCTGCTACTCTTAAATATCCTTGTTTATGTGAAATATATAGCGGTACTATAGTAAAGAATTTTGGAAGTGTTGGAATACAGCCAGAGTTAATTAATTATAAAGGAGATATATGGTGGACAGAACTAAATAGCTCTGGAAATACGTATAAAAAACTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b20083ed364d0abc8db979e9199ed7afbfb400a7db0177c122ae10ee87259cf6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank