Protein

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Genbank accession
WOL25700.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDVNFKGGYREIAYRYELLDRNFNVVGDITDRVGNCTIEHNSFTPVNRTAKFNLKEYTGEAPATINGNYENQYWSSSIPNSKWSTIDCWLNDNFISFPKYQQYSGANNELREAGSKAAPGGGTLPAIGWDALRTGTRVAYTYMSSGGFLNMTSYPSGLQIINKMDAGTDYGLIRSQVTTSVANKRIYFCGYFASDVHAKPDVFVQFSGGSNPEELVQIPTGNITTMNIASGSASRNWKWFEGYYDMVIHGGYTNARMAIGIGSSSSNGLMFIDTFYFDFDRTIPFRFRADATLEIDISIADALNQPNNFVTSLCKLTPTIEEGWYNTSEVILPTVKFEWRVSVNGGSTWTSWTDGSLFLFQDARNAKIQLRFTCESYTQMFKPKVKWWILNTGALTNMINPNKDMIDFAQHRIKPYLQIKNSSGNWQEHPLGVFLMSSPKRADKDKSIYKDIEAYDQLTILSQAKLMYPLCLYPPRDNPSLAGTGQKGGWAKAAKDLLLGVYPLTGYGGRPGLTPGQIWNSSYVNIPDDVYNLPSKSRGRNFKMGETWLAVINQLLNAAGYTPIFCNSNGVLTSIPYVSPDQKPVKHTYIDDETSIIFQEASEELDTFEVANSWVAYQPADQNGIELSGRYTNNNQGHPSSVPSLGRMITDYRDVTGMEGQAEIDRYVYRLAYEASQVYGQINFTTALDPNHEEADIVYLRYQDLGIDGKFVETAWSMELSDDPHMTHRLRRIVSI
Physico‐chemical
properties
protein length:737 AA
molecular weight: 82803,86570 Da
isoelectric point:5,47771
aromaticity:0,12347
hydropathy:-0,40421

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOL25700.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,8919
Central domain 55 326 273 0,4815
C-terminal 327 737 410 0,3930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-326
C-terminal
327-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcaP2EGY
[NCBI] 		3077180 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOL25700.1 [NCBI]
Genbank nucleotide accession
OR599646 [NCBI]
CDS location
range 12068 -> 14281
strand +
CDS
ATGTCGGATGTAAACTTTAAAGGTGGATACCGCGAGATAGCGTACCGCTATGAGTTACTAGATAGAAACTTCAATGTAGTAGGAGATATAACTGATAGAGTAGGCAATTGTACTATCGAGCACAACTCGTTTACCCCTGTCAATCGTACCGCCAAGTTTAACCTAAAAGAGTATACTGGTGAGGCTCCCGCTACGATTAATGGAAACTACGAGAATCAATACTGGTCATCTTCAATTCCTAATAGTAAATGGAGTACAATAGATTGCTGGCTCAACGATAACTTTATAAGTTTTCCTAAGTATCAACAATACTCAGGAGCTAACAATGAACTTAGGGAAGCTGGCTCAAAGGCTGCTCCGGGAGGCGGTACACTACCAGCTATCGGATGGGATGCTCTCAGAACAGGCACAAGAGTTGCCTACACGTATATGAGCAGTGGTGGATTCCTAAATATGACTAGTTACCCTAGCGGGTTACAGATTATCAACAAAATGGATGCTGGTACAGACTACGGGCTAATTAGAAGTCAAGTGACTACTAGCGTAGCTAACAAGAGAATATACTTTTGTGGTTACTTTGCGAGTGATGTACACGCAAAACCTGATGTATTCGTTCAATTCTCAGGAGGTAGTAACCCTGAGGAACTAGTGCAAATCCCAACAGGTAATATAACTACAATGAATATAGCTAGCGGAAGTGCGAGTAGAAACTGGAAGTGGTTTGAGGGTTATTACGATATGGTTATTCACGGTGGGTATACAAATGCTAGGATGGCTATCGGAATAGGAAGTTCTAGTTCAAATGGATTAATGTTTATAGATACATTCTATTTTGATTTCGATAGAACTATTCCCTTTAGGTTCCGAGCAGATGCAACCCTTGAGATAGATATCAGTATAGCTGACGCTCTCAATCAGCCTAACAACTTTGTCACCTCACTGTGTAAGTTAACTCCTACCATAGAGGAAGGCTGGTATAACACATCGGAAGTAATCCTCCCTACAGTTAAATTTGAATGGAGAGTATCTGTCAATGGTGGTTCCACTTGGACTTCCTGGACAGATGGCTCACTATTCCTCTTCCAAGACGCTCGTAACGCCAAGATACAACTCAGGTTTACTTGTGAGTCTTATACCCAGATGTTTAAGCCTAAAGTGAAATGGTGGATTCTCAACACAGGCGCACTCACTAACATGATTAATCCCAACAAGGATATGATAGATTTCGCTCAACACAGAATTAAACCTTACCTGCAAATCAAAAACTCCTCAGGTAACTGGCAAGAACATCCCCTAGGAGTTTTCCTTATGAGTTCCCCTAAGCGAGCTGACAAGGATAAATCAATCTACAAAGACATCGAAGCCTACGATCAGCTAACTATATTGAGTCAGGCTAAATTGATGTACCCTCTTTGCTTGTACCCCCCAAGAGATAATCCCTCGCTAGCAGGGACTGGACAGAAAGGTGGCTGGGCTAAGGCTGCTAAAGATTTACTCTTAGGAGTTTATCCCTTAACAGGCTACGGAGGCAGACCCGGCTTAACTCCCGGGCAGATATGGAACTCCTCCTACGTTAATATCCCCGATGATGTATATAACCTTCCTAGTAAATCTAGAGGGAGAAATTTTAAGATGGGTGAAACTTGGTTAGCTGTAATCAATCAGTTACTTAACGCAGCAGGGTATACACCTATATTCTGCAACTCCAATGGAGTACTAACGAGTATCCCTTATGTATCTCCTGACCAGAAACCAGTTAAGCACACTTATATAGATGACGAAACGAGTATTATTTTCCAAGAAGCCTCTGAGGAATTAGATACTTTCGAGGTAGCTAACTCATGGGTTGCTTACCAGCCAGCCGACCAAAACGGTATCGAACTATCAGGGCGCTACACAAATAACAATCAAGGTCACCCCTCTAGTGTTCCATCTCTAGGGAGAATGATAACAGACTACCGAGATGTAACTGGAATGGAAGGACAAGCCGAAATAGATCGTTACGTTTACCGTTTAGCTTATGAAGCTAGTCAGGTATATGGACAGATTAATTTTACTACTGCGTTAGATCCTAACCATGAGGAAGCTGATATAGTCTACCTCAGGTATCAGGACTTAGGAATAGATGGAAAGTTTGTAGAGACTGCTTGGAGTATGGAACTCTCAGACGACCCTCACATGACACACAGACTTAGGAGGATTGTAAGCATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4821bd3841895e7b5869eea8b71a489f4db65e926a4c01c2575d70a470578b32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6866
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic phages isolated from Egypt for biocontrol of potato soft rot caused by Pectobacterium carotovorum Elhalag,K., Nasr-Eldin,M., Huang,Q., Rabab,A.-E.-A. and Ahmad,A.A. 2024 — GenBank