Protein

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UniProt accession

A0A127AWB0 [UniProt]

Protein name

Pectate lyase

RBP type

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect2

Probability 0,58

Protein sequence

MGTIELNGVVHSNVGKVWYVSTQGNDSNPGTENEPLATVQSAVTKASSGDLIYAKEGTYRPNSISTWGAGLYDQNKQLIFAGDPGRTIFLMDGNEHSARDQHALSTRNPGTKIYHIIFDVIFRDNQNNSNETSLFNTSHIDSKWSEQTKGFVYNCVFKTNKRAAMNYDGSGGGKLYLENCLFDVPDNFIGSYNYPNNYELSNCVTNKSWYKEGLAKKACLENCNFDQDYRIISAPGSWIDTGIYEDKDGSPADLGVYGGRYAWDFDFDVNSIMWVGPAIDEIPGQADIAIPSDIHGSIRVTNHDDIEAKVAILHRDNIISSVQVWEKNLLPSLINIPPPYDNNNNNGWLKSSLGVRLTNELLGISVDRHGSPFQRQAIPASINVFTRGNESLVSSIGVRISNELNSRVLELRGVWDEDISGSIEISSLNYNDLFTRLGVRIPSVLYGQSYIPQNADESLPSSITVTHSDWDHITGKVIVRPEAILGGHVITNNGREDIPSKISIVRGHSILWSNMTVKYRTELNLVTDIIGVGDSDLKSIIDPRYRGNDDAQVSIRVNSPYVHDNEYGKVFKSSIRIIAAGNSDIQSSLSIPILNKMTGISDIIGVNESNIQGSIRINQYDSLPSSIRISPRNKMTSIIEIRPPERINGTVSVNKDSYVRQSLDKFNFGQDPTLTMGYSANKAEKFRTLVGFDISDITNLREGYSIDEVHLKLRFTIGRNPKSSLSLYEAIGDWTELGVTWSNQPRIGGLVSKKYVTDSTEGYITFDITDYIRNAKEQGITYLSFYLNATDELENNTTSFFSKESGNGPTIEYKYYDEVLRNSSKADLDSNVFIYSIGHKDQRSKINVKGIVWSEIPSSILVQRPGDFLSSITVTRSDMSGSMDVIARDDSDIKSSLTVQESLYFDIGGSIIPSKKSMPSEIYVAERYDVSSSLSVRVLDVSEIISWMTVSNPSRPGSIYVIPYVDLEGSISVRREAYDDLESGYFGVSVPQISLSFYVLPHEDLNSSISIRGEEKHELNSSISVNRPDNPSSIYVVPYYDRRGVIRVRRSTRADQISTLAISRPQFSGSLEVMSGDNLKGSIVVNRYDEEILNSQLVISHPDLRGSIHPKIAYDTSGTITVNKLDKDDLISTSYVLHRSDIKGSLEVWGASMIPSSIRVLSGYLRGTIGVPANDETEIEGSITVRQTDESWIKSQIDVWQFRLLPSKIVTRRSEESDIKSSIEVRQLESASIPSKVDIWKYDALKSKIDVRRDAKEFLDSSVYVLFSSDIKSFINVRGYSDVNSSLRVVYGSTSDIDSNLTPRLIGYDDIDTSVFVMYRVNRDLRSKLRVGASNKMTAILDITDAPREYTTIYAVKDSFVRSGMPTLNYGLDKSIPVGKSNNEILRSLIGFDISQIPSGDTIDKVELVINYSTLRDKDIRAYAIGNDWTELGVTWNNHPNSDQYVNSNNPKCTVDTLREVIKFDVTEYVRDGHYDVGDQFVNFLLKAFNESQDGYLNLMSRESGRIPRLEVVHYNPEVWSYNRAHLDAKIDVKYGGLSQIPSTVTVNTYDGYKDTYGKINVLSPSDFESNLSTRIAVSRPDIDGSVNIIGRGDSDIESSITVMISTVEELPSSLVVSQINLGSTIVVPDRSEIGGSITPRILDNSDLLTWITVNAKDRPSSIYVPYHEDLSSSIVVNGYKDYVIDSEIAISRPELEGSILVKIASDNDMDSSISVRNTKDEDLDSTLIVTYGDFKVLLSKINVKVTYHPGENTLPGTIWVGDAGSDLGSIIALSKPSLPSVIGVPYNEDADIESSIAVSRSTIPGSILISNRDDMSGQLEVFYTDSISSELTVTVPSLSGSISVPYSYDMKSKLDIVKVEKEYLNSTLIILERSDLDSSVDVYKHSSIDSIIRVISDGIEGTLIIPRRSDLPSTVDVYKYMDVDGIIRVISGNLGSKISVRRDADHDMDSRLYVVNVNGDSLPSSMFIVTEKDYIKSRIAVRFESPLYGEVDLIGVGESDLVSILRPVVFSDLPAQLSITITNKMTGEADFIPVGDSDVPGTIDLQPAANLPGSITVLMKDESDIEGTITVRAKDNRDLISKLDIRYRGTSDLDSHIRIPYTNKMTGLVDEISLLTTDEGFGDDVVIELKTYRTVIDESSVEEKSYIAGRIYYDDAEFLEDIQVGSSTEDSSSAISHSVIHIDRTDSGNASDSLVTKEFVSFDAETSVESISEITVPVCDSYKSTSSIVELGILGCDSSEGVDFVLFRGIVYYDSAAGEDCYEILINREDSVSHNECSNVVLELCDSSVPNELFLWDILLADQSTGEDCIDLQFEICDNAYSVHTIVDGIQLADHCDEGKGTDSVPVREFVSPDSGVTEHRVVGIYIELCQEVVVTENPVIYLSTCDDGEGSDWTPVREFISPDLGYGQDSLVELMLEVEYEILVNDHVADIDLLIHCDSGNGIDRVAVREFITQDSGYSEDQVSNVNIVVCDDYEVEYLTQIDLSYCDEAVAQELLTKEVMVKDEGSSDEQVVLIHLKDILDDDSSGNDCYQTVEVVVCEINSVTENVLDIELLVSDIGIGLEGHNVLFNIDEGSTAVEQVVDIDVVTCDQGSGIDLIIERGVLVSDSSESEENVVTIHLTNPSDEGSGVDCYLVEVLVSDLGQGNDIIGERGVLSSDPVFGIETSIVAIPTCDTTNGFESGTYIENPVCDGSSGLDVIVERGVVVRELLDSDELEFIEIPVSDTFSEDSRVIHIELPVVDEGNGEDISTEKEVLVSDSSEAQDTVNSVHVINLCDSGQSKDSLSNVNVVACDNAKGSDRLDEKMVVATDSAIAIETSIILIVTEGDASAGTDSAFMTPVLCDEGKGHDSTKEKMVISVDEGYGNSECWISLDLTDTAQYFDTKELMLPAEDEGNGYDNVTSREFVLEDNSDVVDIIVDILLNVEENYTSEDILTVGINGCDDGAGYDFITHRETVLIDNGDSDSHVVDIHLIDIEDNATVIEIPVIRPLVCDSGTIDIEIAKIDKYLFLSDSGTDCESVFIKGTENTEVRDLSYPGQRNHPSDVSLGPIIDGISPTKPNETKTTVWTSKPRVSYILSKYDKALGLWQGDVNINVRLQETSQGIGGYGRFKVFIDDELVVSASIPTGGSQDLNFYYDGLKSKSGGYRLEYEGTFCDERHCQWSRDVFFEFTYTGEFPRGIGDNGADFVLNPDYPANPFIDPYGTSILSNSINCDDDPSRIKLYVSTCGKNLDKYEWSMFDDPDYRDIEVLYHNLAIEARSNKLDRWYVIASDCAVSDNNIIMIELNQSDEGTSVEIPIMDKTLLVGDSADSCEAIFVYGHKNTEDRDLSYPGESTHPTDKVLNPEIINGESATIVGISDYNDWTAGTNQTVRPSRYIGLFKGTITFELRAGVSSDGSNFASSSGRATIYVDGVAYRMAEASASNRGGTPTRITIPFDGWNSPSGGFSAKVTAVPASGHRCTATLSVISLNGTFYPENSLIPDGSALNPKYPGDYFIDPYDRDIFPLGKYCGDNSQVYLYVNSCKQSLHDYNWSMLGHPDYERIKGLYQNTVNHKPYPKSINKNFVLAADCGYGEDESSLAFVLTDNGTLDDEKAILNKHIIVRDSADSIETLVIDQGFSDEVTSEDGMTFGLILCDNAVFVDRITDREFVIQEYIKVVECLKVHVSSDDTSSSEEHVASVHLYPSEDSGTAYDRQLSNGPATSDYGYGNDCYNNVEVVVCELSDSISKVVQLDLSLCEITEAIDFLSGKEFNTWDLDGKGTDCLQLEIPGCESPVIEEDLIYIDLGTHYDESEGQDSVVYKELPVDDEATALDELSFSIELCDSDKFLDGIALEMFYCDTALGFDRITDKELPVIDSSSVDESSLLELEFCEEVVSEFNVVLDLVSHCDTAEGRDILPNKEVPVNDNAESDECLVNNVLVSDEFGFEDGSLEDAAEVVIELCDTAEGIDIVPYKEILVSEELQSIETARLDLTLCDIGKVKDVVVQIDLNFTDESTGIDLVPYKEMPIEESAVLSDCITLESLFCDTGTVKDKDESVIIDLSQCDSGIGIDIVPYKELPVSDSIVSDDCLILELVLCEFGHTRDWVPMMEFCVCDWGTDPQDPGPPNFWCCGRYRPGHIPHPPYFPGDPGYPYDPDHPDYGKPVYPDDPNYPGPPYNPGDPGYPADCADGGTVYPGDVCYPGRPLYPGDPGYPSLPGDPDYGEPIYPGDPEYPPILNPGDPGYPYEPSDPGYGDPVYPGDPDYPKAPGDPTDEPESIIGHPPTPDVGVAIDCITIEQFLCDDGEGQDKLGFRRVPYHIDNDWIVDPFTWKCGPNFEWDIEEIEFEIKPIEIQVEVTEYKFNFRELEFKFRETPEKFEFADKLMFKACPLDIFEFQEAKPIVIEMIECPFTIQCTELEED

Physico‐chemical properties

protein length:	4401 AA
molecular weight:	486229,37970 Da
isoelectric point:	4,29302
aromaticity:	0,08180
hydropathy:	-0,26353

Domains

Domains [InterPro]

DC_0614
ATT
2–327

DC_0614 IPR055372 DC_0721 DC_0721 DC_0721

IPR011050
STR
13–210

IPR011050 DC_0721 DC_0721 IPR055372 DC_0721 DC_0721

IPR052052
Unmapped
14–86

IPR052052 NF033679 NF033679

IPR012334
STR
17–233

IPR012334

A0A127AWB0

1 4401

Architecture

ATT

STR

ATT 2-327 | STR 328-3062 | STR 3571-4401

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0614	ATT	DC_0614	2	327	Novel HMM	DC_0614	N-terminal	Low	Positional only	11 proteins / 11 hits
IPR011050	STR	IPR011050	13	210	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR052052	Unmapped	-	14	86	InterPro	Polysaccharide Lyase 9	-	-	-	-
IPR012334	STR	IPR012334	17	233	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
DC_0721	STR	DC_0721	234	808	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
IPR055372	CBM	DC_0784	650	809	InterPro cluster	Carbohydrate-binding module family 96	Central	High	Text match	6 proteins / 9 hits
NF033679	Unmapped	-	655	811	NCBIfam	DNRLRE domain	-	-	-	-
DC_0721	STR	DC_0721	808	986	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
DC_0721	STR	DC_0721	985	1507	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
IPR055372	CBM	DC_0784	1350	1512	InterPro cluster	Carbohydrate-binding module family 96	Central	High	Text match	6 proteins / 9 hits
NF033679	Unmapped	-	1357	1512	NCBIfam	DNRLRE domain	-	-	-	-
DC_0721	STR	DC_0721	1507	1764	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
DC_0721	STR	DC_0721	1745	3062	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
DC_0721	STR	DC_0721	3571	4188	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits
DC_0721	STR	DC_0721	4185	4401	Novel HMM	DC_0721	Central	Low	Positional only	5 proteins / 5 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A127AWB0

1 4401

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	82	82	0,7471
Central domain	83	3786	3705	0,2126
C-terminal	3787	4401	614	0,0166

Legend: N-terminal Central domain C-terminal

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacillus phage SP-15 [NCBI]	1792032	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0005576	extracellular region	Cellular Component	IEA:UniProtKB-SubCell (UniProt)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	Molecular Function	IEA:TreeGrafter (UniProt)
GO:0046872	metal ion binding	Molecular Function	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

No tertiary structures available.