Protein

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Genbank accession
YP_004421487.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MGYLGSSAFAGVKAGSSDVSKIYVGSSLAWESSPSSAFKLLTYTGNGAARSITGAGFEPGLVWINKTSSSSKRDMIFDVTRGPTKLVTLNYASAENTNVNSLTSFDADGFSLGTEYDTNQSGVVYRAFCWGGLGPAATNNDGTTATNVRVSAGTGFSVFTYTGNSVSNTTIGHGLGSTPDFVLIQYRFPNLSYLNRVYAPSVSTGNQVWTIAYQSALTTGSSAILAVGPNTITLSSNGSVNGTNGGGLSYVGYAFKSVPGLSKFGVVTNDGSGVVNVDCGFMPQFLLLKAYNVFQNWYVCTPTGGTTGYVTFTTPPTDQASNVSSNIAITGTGFSLDPGAPGNVSGGTSSLFYMAYG
Physico‐chemical
properties
protein length:357 AA
molecular weight: 36859,34650 Da
isoelectric point:6,55032
aromaticity:0,11765
hydropathy:0,02969

Domains

Domains [InterPro]
IPR055906
STR
34–356
IPR055906
YP_004421487.1
1 357
Architecture
STR
STR 34-356 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004421487.1
1 357
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8922
Central domain 11 208 199 0,0018
C-terminal 209 357 148 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-357

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS2
[NCBI] 		753084 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0204
[NCBI] 		232353 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421487.1 [NCBI]
Genbank nucleotide accession
NC_015463.1 [NCBI]
CDS location
range 27178 -> 28251
strand +
CDS
ATGGGATACCTCGGAAGTTCTGCATTTGCTGGGGTCAAGGCTGGCTCCAGCGACGTGTCCAAGATTTATGTAGGCAGCAGTCTGGCGTGGGAATCAAGCCCATCGTCCGCGTTTAAGCTTTTGACCTACACGGGTAATGGAGCTGCACGCTCTATCACTGGTGCTGGGTTTGAGCCTGGACTGGTTTGGATAAACAAAACCAGTAGTTCCTCAAAGCGTGATATGATTTTTGACGTAACTAGGGGGCCTACAAAGCTTGTTACCCTTAACTATGCCAGTGCAGAAAACACTAACGTCAATTCATTAACCTCCTTCGACGCGGATGGATTTAGCCTAGGTACTGAATATGACACAAACCAAAGCGGCGTAGTGTATCGCGCATTTTGCTGGGGAGGGCTTGGGCCGGCGGCCACAAACAATGACGGCACTACTGCTACAAACGTTAGAGTCAGCGCAGGGACTGGCTTTAGCGTATTCACTTATACTGGCAATTCGGTTTCTAATACCACAATCGGCCACGGCCTCGGAAGCACTCCAGACTTTGTTCTGATTCAATATCGGTTTCCTAACCTTAGCTATCTTAACAGGGTTTACGCTCCTTCGGTCAGTACGGGAAACCAAGTCTGGACTATTGCGTATCAGTCTGCGCTGACAACGGGCTCAAGCGCGATATTAGCCGTTGGACCAAACACAATTACCTTGTCAAGCAACGGTTCAGTGAACGGGACAAACGGCGGAGGGCTGTCGTATGTGGGTTACGCATTTAAGTCGGTTCCTGGTCTCAGTAAATTTGGCGTGGTTACGAACGATGGCAGCGGAGTCGTCAATGTTGACTGTGGATTTATGCCGCAATTTCTGCTGTTAAAAGCCTATAACGTTTTCCAAAACTGGTACGTGTGCACTCCTACCGGCGGCACTACTGGCTATGTTACTTTCACTACACCTCCCACCGACCAGGCCAGCAACGTTAGCTCAAACATTGCAATTACGGGCACGGGCTTCAGCCTTGACCCAGGCGCCCCTGGCAATGTCAGCGGGGGCACGAGCAGCTTGTTCTACATGGCCTACGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c93da656034156e7fb2db9ac5f28ee524315c9bd4e939044a9a5cdc8335f8661
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8222
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50